Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00958 ATGTCTTCAACATTGGATTCCGAAGCCACCGTAGTAGAAGAGTGTCGCGGTGTTCTTCACGTTTATAGCGACGGTTCCATAATACGCTCTTCGCGCCCAAGCTTCAACGTCCCTGTAGTCGAGGACGGCACCGTTTTGTGGAAAGATGTCGTTTTTCACCCTGCCCATGATCTTCAGCTTCGGCTCTACAAGCCAGCCGACTCAGCCGGCTCCAAGCTTCCCATCTTTTTCTACTTTCACGGTGGCGGCTTTTGCATCGGTTCACGCACTTGGCCTAATTGTCAAAACTACTGTTTTCGTCTTGCTTCCCAGCTTCGAGTTATAGTAGTAGCTCCAGATTACCGGCTGGCTCCCGAGAATCGACTCCCTGCCGCAATCGACGACGGCTTCGCGGCTTTTAAGTGGCTTCAGACTCAAGCCGCGAGTAATGAGCCGGACCCATGGTTGAGCAACGTGGCTGATTTTAGCCGGGTGTTCATCTCGGGTGACTCGGCTGGAGGGAACATAGCTCACCATTTGGCGGCTGGACTTGGATTCGGGTCGCCCAAGTTGGAGCCGGTTCGGGTGAGAGGTTATATTCTATTGGCACCTTTCTTTGGTGGAACTGTCCGAACGAAGTCAGAAGCTGAAGGACCAAAAGATGCTTTTCTGAATTTGGAACTTATTGATAGGTTTTGGAGGCTTTCTATTCCGATTGGGGAAACTACAGATCACCCTATTGTGAATCCATTTGGACCAAACAGCGAGAGCCTTGAAGGGAAAAGTCTAGAAGCAATTCTGGTGGTGGCCGGAGGAAGTGATTTGCTTAAAGAGAGAGCAGAGGATTATGCAAGGAGGCTTAAGGAGTGGGGTAAAGATATAGAGTATGTGGAATTTGAAGGACAGCAACATGGTTTCTTCACTATTGATCCCAACTCAGAACCCTCAAACAAGTTGATGTTCATCATCAAACATTTCATAGAGAAGAATAATGTTTGA 978 0.4857 MSSTLDSEATVVEECRGVLHVYSDGSIIRSSRPSFNVPVVEDGTVLWKDVVFHPAHDLQLRLYKPADSAGSKLPIFFYFHGGGFCIGSRTWPNCQNYCFRLASQLRVIVVAPDYRLAPENRLPAAIDDGFAAFKWLQTQAASNEPDPWLSNVADFSRVFISGDSAGGNIAHHLAAGLGFGSPKLEPVRVRGYILLAPFFGGTVRTKSEAEGPKDAFLNLELIDRFWRLSIPIGETTDHPIVNPFGPNSESLEGKSLEAILVVAGGSDLLKERAEDYARRLKEWGKDIEYVEFEGQQHGFFTIDPNSEPSNKLMFIIKHFIEKNNV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00958 325 SUPERFAMILY alpha/beta-Hydrolases 15 322 IPR029058 -
Vian5g00958 325 PANTHER ARYLACETAMIDE DEACETYLASE 15 304 - -
Vian5g00958 325 Gene3D alpha/beta hydrolase 16 322 IPR029058 -
Vian5g00958 325 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Vian5g00958 325 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00958 Vian-Chr5 30853805 30854853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00958 11 321 Carbohydrate Esterase AT5G16080 35.843 1.61e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00958 - - aprc:113858789 564.688