Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00929 ATGCACAAAGTTCGAAGCGTCCTAAATGTTACCCTCAACGATCATAACCCAATACGAATGATGGATAATGAAGATAGTTGGCGTAGAGCATCAAACAACCAAAATATAAACTCATTCACAACTCCTAAGATTAGAGAGCTTGTGTATGGTCTCTTCATCACCACAATTTTGAACACCCTCTATGTGCTCACCATAAGCTTCATTGGAAGCGTGTTAGGCGGTGCCAGCTTCAACCCTTCAACCACAGTTTCATTCTACACTGCAGGTCTCAGACCTGATTCATCTCTTGCATCAATGGCTGTTAGCTTCCCTGCTCAGGCATTTGGTGGGGCTGTTGGAGCCAAGGCTCTTCTTCTTGTTATGCCATCACAGTACAAGCAGATGCTGAAAGGTCCTTTTTTGAAGGTGGACTTGCACACTGGTGCCATTGCTGAGGGGTTCTTGACCTTCACTCATAACATGGCTATTCTCTTTCTGATGCTGAGGGGTCCCAAGAACCCTTTTTTGAAGGTCTATTTGCTTTCTGTTGCTACTGTTGCTTTGGTTATCCCTGGTGCTGGGTTCACTGGCCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTGTCAACAACAAGCACAAACACCTGGGAGCAGTTTTATGTCTATTGGGTATGCCCTTTCGTAGGAGCATCCTCTGCTGCTTTCATCTTCAGGTCTCTATTTATGACACCAATCAAGCACAAGAAGGCTTGAAATGCATTTTAATTGCTTCTTCTTCCCCTGTGTTGTGTGTATCTGTATGTTTCTATTATATGCCATTCTATTATCCTCCGTTAATATTTAAAGTTTTTTAG 840 0.4369 MHKVRSVLNVTLNDHNPIRMMDNEDSWRRASNNQNINSFTTPKIRELVYGLFITTILNTLYVLTISFIGSVLGGASFNPSTTVSFYTAGLRPDSSLASMAVSFPAQAFGGAVGAKALLLVMPSQYKQMLKGPFLKVDLHTGAIAEGFLTFTHNMAILFLMLRGPKNPFLKVYLLSVATVALVIPGAGFTGPSMNPANAFGWAFVNNKHKHLGAVLCLLGMPFRRSILCCFHLQVSIYDTNQAQEGLKCILIASSSPVLCVSVCFYYMPFYYPPLIFKVF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00929 279 SUPERFAMILY Aquaporin-like 46 211 IPR023271 -
Vian5g00929 279 PANTHER AQUAPORIN SIP1-1 46 235 IPR044222 GO:0015250
Vian5g00929 279 Pfam Major intrinsic protein 59 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g00929 279 Gene3D Glycerol uptake facilitator protein. 30 249 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00929 Vian-Chr5 30483048 30484785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00929 56 208 Major Intrinsic Protein MIP AT3G04090 46.405 6.92e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00929 K09875 - gmx:100775829 267.314