Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00917 ATGTTTGTTTGCGTTTTCCTTTTATGGGGAAACGAGTTCCACCATGCATATTTGTGTAAAGAAAAAAAGAGAATAAAGCGAAGAAGAATAAAGCTAAGTAAAGAAAAATTAACTCCCAAAAAACGAAACCTAGAAGAAGCATTGGTGTTCCTTAGTTTCGTCACTCGCTCCAATCTCAGAGTCAAAGTGATGGCCGCAACAACAGCAACATCACTCACTCTTTCAAAACCTTCTTCTCTGCCATTCAATCATACCCATGCTTTTCCTAAAACGCCCTCAACACTTCCCACCCTCCTTCGTTCCGCCGTCAAACCTCTCTTCCTCGTATCCTCCAAAAACCCCCTTTCCGATGTTATCTCTTTGCCCGCCGCAGAAGACAGCGCGTGGGATGATGAGAAGCCTCGCGAGGAGTGCGGCGTCGTAGGCATCTACGGCGACCCGGAGGCCTCCCGTCTCTGCTACCTCGCCCTTCACGCGCTCCAGCACCGCGGCCAGGAAGGCGCCGGAATCGTAACCGTTCACAACGACGTCCTCCAATCCATCACCGGCGTGGGCCTCGTCTCCGACGTCTTCAACGAGTCCAAGCTTGACCAGCTCCCCGGCAGCCTCGCCATCGGCCACGTCCGTTACTCCACCGCCGGTCAGTCCATGCTAAAAAACGTCCAGCCTTTCGTCGCTGGTTACAGATTCGGCTCCGTTGGGGTCGCGCATAACGGTAACCTCGTCAACTACCGCGCTCTTCGGTCCGACCTCGAGGACTCTGGCTCCATCTTCAACACCACCTCTGACACCGAGGTCGTCCTCCACCTCATCGCCACCTCCAAGCACCGCCCCTTCATCCTCCGCATCGTCGACGCCTGCGAGAAGCTGAAGGGCGCCTACTCCCTCGTCTTTGTTACCGAGGACAAACTGGTGGCCGTTCGTGATCCCTTCGGGTTCCGTCCCCTCGTCATGGGGAGGAGAAGCAACGGCGCTGTCGTCTTCGCCTCCGAAACCTGCGCGCTTGATTTGATCGAAGCGACGTACGAGAGGGAGGTTTTTCCGGGCGAGGTTCTCGTGGTGGATAAAAACGGTGTTCAGAGTCTCTGCCTAATGTCCCATCCTCAACCCAAGCAATGCATTTTCGAGCATATCTACTTCGCGCTTCCGAATTCGGTTGTTTTCGGGAGGTCTGTGTACGAGTCCCGCAGAAGATTCGGGGAGATTTTAGCCACTGAGAGTCCCGTGGACTGCGATGTTGTGATTGCTGTTCCTGATTCTGGGGTTGTGGCTGCTCTTGGGTATGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGTTTGATCAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCCTCTCAGAAGATTAGGGACTTTGGTGTGAAGCTGAAGCTATCACCGGTGCGTGCTGTGCTTGAGGGTAAACGTGTGGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCGTCCAAGATTGTTAGGTTGTTGAAGGAAGCTGGTGCCAAGGAGGTTCACATGAGGATTGCTAGCCCTCCCATTATTGGGTCTTGTTACTATGGGGTTGATACTCCCAGTACAGAAGAGTTGATTTCTAATAGAATGAGTGTGGAAGAGATAAGGAATTTCATTGGGTCGGATTCACTGGCATTTTTGCCCTTTGATAGCTTGCAGAAGTTGCTGGGGAGTGAAAGCCCTAATTTCTGCTATGCTTGCTTCTCTGGGAATTACCCTGTTGAGCCTACAGAGCTCAAGGTGAAGAAGGTTGGGGACTTTGTTGATGATGGCTTGAATGGGAGCTTGGACTCTATTGGTGGTGGTTGGGTTCAAGCAAACCGAAAGCAAATAGAGATTGGTAGTTAG 1866 0.5214 MFVCVFLLWGNEFHHAYLCKEKKRIKRRRIKLSKEKLTPKKRNLEEALVFLSFVTRSNLRVKVMAATTATSLTLSKPSSLPFNHTHAFPKTPSTLPTLLRSAVKPLFLVSSKNPLSDVISLPAAEDSAWDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNDVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRALRSDLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLKGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSTEELISNRMSVEEIRNFIGSDSLAFLPFDSLQKLLGSESPNFCYACFSGNYPVEPTELKVKKVGDFVDDGLNGSLDSIGGGWVQANRKQIEIGS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00917 621 CDD GPATase_N 138 388 IPR035584 -
Vian5g00917 621 Pfam Phosphoribosyl transferase domain 412 507 IPR000836 -
Vian5g00917 621 Gene3D - 397 561 IPR029057 -
Vian5g00917 621 CDD PRTases_typeI 400 511 IPR000836 -
Vian5g00917 621 NCBIfam amidophosphoribosyltransferase 138 579 IPR005854 GO:0004044|GO:0009113
Vian5g00917 621 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 138 357 IPR017932 -
Vian5g00917 621 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 136 585 - -
Vian5g00917 621 SUPERFAMILY PRTase-like 373 584 IPR029057 -
Vian5g00917 621 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 138 579 IPR029055 -
Vian5g00917 621 Hamap Amidophosphoribosyltransferase [purF]. 137 578 IPR005854 GO:0004044|GO:0009113
Vian5g00917 621 Pfam Glutamine amidotransferase domain 216 335 IPR017932 -
Vian5g00917 621 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 138 361 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00917 Vian-Chr5 30284488 30286353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00917 115 611 PRT Gene Family AT4G34740 84.137 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00917 K00764 - gmx:100801720 987.252