Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00901 ATGTGCTTGCCTGAAAATGATGAGGAAGAAGCGACTCTGAACGACGACCTTGCGCTTAATCGCGATTGCATTTTCTCTGATTTTGGGCTTGGCAAACGGAAAAACTCGCAATTGGCACTTTCACAGCGGCGCTTGGTGGTGATTTCTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCTGGGACGAAAGAGTATGTTCATGTTCGTGTACAACAACGTAACGGAAGGAAAAGCCTAACAACTGTTCAAGGATTAAAGAAAGAGTATAGCTACAGCAAAATACTCAAAGACCTGAAGAAAGAATTCTGCTGCAATGGTACTGTTGTTCAAGACCCTGAGTTGGGCCAGGTTATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATAGTGAAGAAAGAACATATCAAGCTTCATGGTTTCTAA 453 0.4371 MCLPENDEEEATLNDDLALNRDCIFSDFGLGKRKNSQLALSQRRLVVISDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKLHGF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00901 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 49 150 - -
Vian5g00901 150 Gene3D - 29 150 - -
Vian5g00901 150 FunFam Eukaryotic translation initiation factor SUI1 39 150 - -
Vian5g00901 150 Pfam Translation initiation factor SUI1 65 139 IPR001950 GO:0003743|GO:0006413
Vian5g00901 150 SUPERFAMILY eIF1-like 46 150 IPR036877 GO:0003743|GO:0006413
Vian5g00901 150 NCBIfam translation initiation factor SUI1 47 150 IPR005874 GO:0003743
Vian5g00901 150 CDD eIF1_SUI1 66 149 IPR005874 GO:0003743
Vian5g00901 150 ProSiteProfiles Translation initiation factor SUI1 family profile. 68 138 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00901 Vian-Chr5 29994321 30002352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00901 50 150 Eukaryotic Initiation Factors Gene Family AT1G54290 93.069 1.95e-67 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00901 K03113 - gmx:100784390 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00901 5 29994321 30002352 Vian5g00901 5 29994321 30002352 ECH