Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00888 ATGGTACCAGCATTTTCCCAAAGTTGCCATGATGTGATTAGCGAGTGGAAGGGAATGTTGTCATCAGATGGAAAATGTGAGATTGATGTTTCGCCTTTCATTCAGAATTTGACTCGTGATGTAATTTCTAGAACGGCTTTCGGAAGCAGCTATGCAGAAGGAAAACAGATATTTCAGTTTCTCAGAATTCAGGGGCACCTTGTCATGACTGCAAAGTACTATAACACACCAATATTGCGGCATTTACCGACACCTACCAAAATGAAGATGAGAGCAGTTGATAAAGAAATGAAAAATTCAATTGGGAATATCATAAAAAAACGAGAGAAAGCCATGAAGAAGGGTGAATGCAACAATAAAGATTTATTAGGCATGCTTTTAGAATCAAATCAAATGGAAATCCAGGGAAATGGAAACCGTAAGAGTGTTGGAATGACTATTGAAGAAGTAATTGGTGAGTGCAAGTTATTCTACCTAGCAGGGCAAGACACGACTTCATCTTTGCTGGTTTGGACATTGATCATGTTAAGTAGGTATCCTGAATGGCAAAATCGAGCAAGGGAGGAAGTTCTTCATGTTTTTGGAAAACAAAATCCAAACATTGATGGGTTAAGTCAGCTCAAAACTATGACCATGATTCTGTATGAAGTTCTGAGGTTATTCCCTCCCACTGTTTTCCACAATCGCAGACTCCAGAAGGATATGAAACTTGGAAACCTGTCACTACCTGCAGGAGTAAATGTTTCCTTGCCAATTTTTTTACTTCACCAGGATGTTGATATATGGGGTAATGATGCAATGGAGTTCAAACCAGAAAGATTCTCTGAAGGGGTTGCAAAGGCAACAAAAGGCCAAGTTGTATTTTACCCATTTGGATGGGGTCCTAGAATTTGCATTGGCCAAAACTTTGCCTTGTTGGAAGCCAAGGTTGTGTTGTCATTGTTTCTGCAGAATTTCTCATTCGAGCTTTCTCCTGTTTATGTGCATGCTCCTGCAGTTATGCTTAGTTTGCAACCAAAACACGGTGCGCCACTTATTTTGCAAAACCTATGA 1053 0.3979 MVPAFSQSCHDVISEWKGMLSSDGKCEIDVSPFIQNLTRDVISRTAFGSSYAEGKQIFQFLRIQGHLVMTAKYYNTPILRHLPTPTKMKMRAVDKEMKNSIGNIIKKREKAMKKGECNNKDLLGMLLESNQMEIQGNGNRKSVGMTIEEVIGECKLFYLAGQDTTSSLLVWTLIMLSRYPEWQNRAREEVLHVFGKQNPNIDGLSQLKTMTMILYEVLRLFPPTVFHNRRLQKDMKLGNLSLPAGVNVSLPIFLLHQDVDIWGNDAMEFKPERFSEGVAKATKGQVVFYPFGWGPRICIGQNFALLEAKVVLSLFLQNFSFELSPVYVHAPAVMLSLQPKHGAPLILQNL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00888 350 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 343 - -
Vian5g00888 350 Pfam Cytochrome P450 1 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 291 300 IPR017972 GO:0005506|GO:0016705
Vian5g00888 350 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS E-class P450 group I signature 288 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS E-class P450 group I signature 298 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 SUPERFAMILY Cytochrome P450 1 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 PRINTS P450 superfamily signature 289 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00888 350 Gene3D Cytochrome P450 1 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00888 Vian-Chr5 29712786 29714255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00888 1 350 Cytochrome P450 AT3G14680 54.545 6.89e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00888 - K17873 var:108322027 630.172