Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00884 ATGGAGCAATTTTCGTTTTCTTTCTTAAAAGCAATAGTATGTCTGGTGGTGAGCGTGATCGGTGTTGTGATTCCGTTATGGGCGGTGAAGATGGTGTACACGTTGTGGCTTTGGCCTAAGGCGTTCGAGAAACTTCTGAGAGCACAAGGTCTTCGTGGTGACCCATACTCCCTACTTTTCACCTCCAATCAAAACCCTGCTCCACAAAACAACCCTCAATTGCAATCTTTTGTTGTCTCCGACGATGTTGCTCCTCGCTTGTCCTTGCGGCCTAACAACACTGTTGCCAAATACGGTTCACTTTTTCTACCTCCTCAAAATTTGTTGCTATACATAAATGTTAGGTCTACCGAGTTTGGGCATGAAAGCAAGAATTCGTTTTTTTGGGAAGGCACAACACCAAAGGTCATCATCACTGATCCAAATCAAATTAAAAAAGTCTTCAATAACATTCATGATTTCCAGAAACAAAATATAAGTGGCATTGCCAAGTTCTTGGTCACTGGTCTGATAAATTCCGAGGGTGATAAGTGGATTCAACATAGAAAGATTATCAACCCTGCATTCCACGTGGAAAAATTGAAAAACATGCTACCAGCATTTTCCCAAAGTTGTCATGATGTGATTAGCGAGTGGAAGGGAATGTTGTCATCAGATGGAAAATGTGAGATTGATGTTTCGCCTTTCATTCAGAATTTGAGTCGTGATGTAATTTCTAGAACGGCTTTCGGAAGCAGCTATGCAGAAGGAAAAAAGATATTTCAGCTTCTCAGAATTCAGGGGTACCTTGTCATGACTGCAAAGTACTCTAACACACCAATATTGCGGCATTTACCGACACCTAACAAAATGAAGATGAGAGCAGTTGATAAAGAAATGAAAAATTCAATTGGGAATATCATAAAAAAACGAGAGAAAGCCATGAAGAAGGGTGAATCCAACAATAAAGATTTATTAGGCATGCTTTTAGAATCAAATCAAATGGAAATCCAGGGAAATGGAAACCGTAAGAGTGTTGGAATGACTATTGAAGAAGTAATTAGTCAGTGCAAGTTATTCTACCTAGCAGGACAAGACACCACTTCATCTTTGCTGGTTTGGACATTGATCATGTTGAGTAGGTATCCTGAATGGCAAAATCGAGCAAGGGAGGAAGTTCTTCATGTTTTTGGAAAACAAAATCCAAACATTGATGGGTTAAGTCAGCTCAAAACTATGACCATGATTCTGTATGAAGTTCTGAGGTTATTCCCTCCCACTGTTTTCCACAATCGCAGACTCCAGAAGGATATGAAACTTGGAAACCTGTCACTACCTGCAGGAGTAAATGTTACCTTGCCAATTTTTTTACTTCACCAGGATGTTGATATATGGGGTAATGATGCAATGGAGTTCAAACCAGAAAGATTCTCTGAAGGGGTTGCAAAGGCAACAAAAGGCCAAGTTGTATTTTACCCATTTGGATGGGGTCCTAGAATTTGCATTGGCCAAAACTTTGCCTTGTTGGAAGCCAAGGTTGTGTTGTCATTGTTTCTGCAGAATTTCTCATTCGAGCTTTCTCCTGTTTATGTGCATGCTCCTGCAGTTATGCTTAGTTTGCAACCAAAACACGGTGCGCCACTTATTTTGCAAACCCTATGA 1641 0.4034 MEQFSFSFLKAIVCLVVSVIGVVIPLWAVKMVYTLWLWPKAFEKLLRAQGLRGDPYSLLFTSNQNPAPQNNPQLQSFVVSDDVAPRLSLRPNNTVAKYGSLFLPPQNLLLYINVRSTEFGHESKNSFFWEGTTPKVIITDPNQIKKVFNNIHDFQKQNISGIAKFLVTGLINSEGDKWIQHRKIINPAFHVEKLKNMLPAFSQSCHDVISEWKGMLSSDGKCEIDVSPFIQNLSRDVISRTAFGSSYAEGKKIFQLLRIQGYLVMTAKYSNTPILRHLPTPNKMKMRAVDKEMKNSIGNIIKKREKAMKKGESNNKDLLGMLLESNQMEIQGNGNRKSVGMTIEEVISQCKLFYLAGQDTTSSLLVWTLIMLSRYPEWQNRAREEVLHVFGKQNPNIDGLSQLKTMTMILYEVLRLFPPTVFHNRRLQKDMKLGNLSLPAGVNVTLPIFLLHQDVDIWGNDAMEFKPERFSEGVAKATKGQVVFYPFGWGPRICIGQNFALLEAKVVLSLFLQNFSFELSPVYVHAPAVMLSLQPKHGAPLILQTL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00884 546 Pfam Cytochrome P450 128 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Vian5g00884 546 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS P450 superfamily signature 356 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 Gene3D Cytochrome P450 95 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS E-class P450 group I signature 345 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS E-class P450 group I signature 233 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PRINTS E-class P450 group I signature 365 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00884 546 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 539 - -
Vian5g00884 546 SUPERFAMILY Cytochrome P450 105 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00884 Vian-Chr5 29592897 29595598 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00884 11 546 Cytochrome P450 AT3G14690 45.455 3.68e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00884 - K17873 gmx:100790445 719.153