Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00821 ATGGGTTGTTGTGTTTCAACAAGCAGTAGAAGTACTTGTAGCAGCAAGAGCAATGGAGACACGGTCTCTCCATCTTGTTTAGAAATTGGATTCTGTGGGCAGAAGAGAACAAGACGAACATTCTCTGATCATGTTATTTCTCTTCACCATTTACCATCCTTACCTAGCAGAATTTTCTCTAATGGAAAGAGCCGGGGTTCGTGCATCTTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTTTTTGATGGGCATGGTCCGCACGGTCATCTTGTTGCACGCAAAGTTAGGGATGCTCTACCTCTTAAACTGCTATCATTTTTGCATTCTTCTGAATCAAAGCGAAATGGGTCTGGGAAAACTTGCTTCAAAGGGAATGTAAAATCTGATAGTGTAGAATTTGAGAAGGATTGCTCCACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAAGCCATGGATAAGGAGCTCAGGTCCCATCCAAATTTGGATTGCTTCTGCAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGGGATTCTCGGGCAATCATGGGATCAAAGGATAGCAATGATTCAATGGTGGCTATTCAGTTGACTGTGGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGCTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCCTTTGGAGATTTCTGCTTGAAGGAGTACGGTGTGATTTCTATCCCCGAGTTTTCCCATCGGCAGCTTACTGACAGAGATCAATTCATTGTTCTTGCATCAGACGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAAATAGTATCTTCAGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTGAAGTACCCTACTTCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATACAGAGCAACCATTCAGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAGAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTAATGGAGCACTAACTGTTGATGTCGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1413 0.4402 MGCCVSTSSRSTCSSKSNGDTVSPSCLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKTCFKGNVKSDSVEFEKDCSTEDKMNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALTVDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00821 470 MobiDBLite consensus disorder prediction 1 21 - -
Vian5g00821 470 CDD PP2Cc 65 370 IPR001932 -
Vian5g00821 470 PANTHER PROTEIN PHOSPHATASE 65 368 IPR015655 GO:0004722|GO:0006470
Vian5g00821 470 Gene3D - 58 378 IPR036457 -
Vian5g00821 470 Pfam Protein phosphatase 2C 97 347 IPR001932 -
Vian5g00821 470 FunFam probable protein phosphatase 2C 52 57 373 - -
Vian5g00821 470 MobiDBLite consensus disorder prediction 380 447 - -
Vian5g00821 470 SMART PP2C_4 50 368 IPR001932 -
Vian5g00821 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Vian5g00821 470 MobiDBLite consensus disorder prediction 381 447 - -
Vian5g00821 470 SUPERFAMILY PP2C-like 57 372 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00821 Vian-Chr5 28335578 28338062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00821 1 470 PP2C-type Phosphatase Gene Family AT1G03590 70.711 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00821 - - gmx:100813306 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00821 5 28335578 28338062 Vian5g00821 5 28335578 28338062 ECH
Vian11g00769 11 8272225 8274612 Vian5g00821 5 28335578 28338062 PCT