Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00811 ATGAACGTCATTAATTTACGATTTTGCCACTCTCCCCAACTCCTCCATTCACCAAATCTCCTCTTCGTTGTTCCTTCTTCACAAACTCCAAACTTCACTCTGAGAAACCCAACAACCCCATTTGCTATTTCCTTAAAAAATCGATTCTCTTCTCCAATTCGTGCGTCCATGGCCTCTTCAGCCTCCGTCACGGAGAACGAAACAAAGCCATTTTCCGTTCTCTTCGTGTGCCTTGGCAACATCTGCAGAAGCCCCGCTGCCGAAGGAGTCTTCACTGACTTAGTCAACAAAAAGAGCCTCAATTCGATTCTCAGAATTGATTCGGCTGGCACCATCAATTACCACGAGGGAAATGAAGCGGACCCGAGAATGAGGGCAGCCTCAAAGAAGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCAAGCCCTCTGATTTCACTGACTTTGACCTCATTCTGGCTATGGACAAGCAGAACAGAGAGGACATACTGGTGGCCTTTAATAGATGGAAAGGAAAACATTCCTTACCGGATGATGCATATAAAAAGGTAAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCCTATTATGGTGGAGCGCAAGGGTTTGAGAAGGTAATGATATTCATGTTGGTTATAGTAGTACTTGACTTGTATAGTGTTATGATAGTTTTGAATGATGGTACTGCTTGGTGGATCTGGTCTCAAATTGTTGATGATGCAAGAAATGCATCTATTTTCAAAGATGACAAGCACTATTGA 786 0.43 MNVINLRFCHSPQLLHSPNLLFVVPSSQTPNFTLRNPTTPFAISLKNRFSSPIRASMASSASVTENETKPFSVLFVCLGNICRSPAAEGVFTDLVNKKSLNSILRIDSAGTINYHEGNEADPRMRAASKKRGIQITSISRPIKPSDFTDFDLILAMDKQNREDILVAFNRWKGKHSLPDDAYKKVKLMCSYCKKHDESEVPDPYYGGAQGFEKVMIFMLVIVVLDLYSVMIVLNDGTAWWIWSQIVDDARNASIFKDDKHY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00811 261 PRINTS LMW phosphotyrosine protein phosphatase signature 200 215 IPR017867 GO:0004725|GO:0006470
Vian5g00811 261 PRINTS LMW phosphotyrosine protein phosphatase signature 116 132 IPR017867 GO:0004725|GO:0006470
Vian5g00811 261 PRINTS LMW phosphotyrosine protein phosphatase signature 73 90 IPR017867 GO:0004725|GO:0006470
Vian5g00811 261 SMART LMWPc_2 71 229 IPR023485 -
Vian5g00811 261 Gene3D - 54 218 - -
Vian5g00811 261 SUPERFAMILY Phosphotyrosine protein phosphatases I 69 215 IPR036196 -
Vian5g00811 261 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 45 215 - -
Vian5g00811 261 CDD LMWPTP 72 215 - -
Vian5g00811 261 Pfam Low molecular weight phosphotyrosine protein phosphatase 73 215 IPR023485 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00811 35 215 Protein tyrosine phosphatase (PTP) family AT3G44620 58.654 2.66e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00811 K25307 - gmx:100797254 340.887