Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00806 ATGGCTTCCTCAAGCGGAACATGTTCGGGTTCATCCTCTCTGCTTCAGAACTCAGGTTCTGAGGAGGACTTGCAAGCGGTAATGGATCAGAGAAAGAGGAAGAGAATGACATCGAATCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTGGTTACCCAAGTGGCTCAGCTGAGAAAGGAGAATCAGCAGATACTCACCACCGTCAACATCACCACGCAGCAGTTCTTGAGCGTTGAGGCTGAGAACTCGGTGCTCCGGGCTCAGGTGGGTGAGCTGAGCCATCGGTTAGAGTCTCTGAACGAGATCATCGAACTCTGGTTGTGTGTGAGAAGGAGAGGGGAAGATGAAGTGGGAATTCCCACTGTGCCCTTTCTCTAA 399 0.5213 MASSSGTCSGSSSLLQNSGSEEDLQAVMDQRKRKRMTSNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIELWLCVRRRGEDEVGIPTVPFL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00806 132 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Vian5g00806 132 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Vian5g00806 132 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 113 - -
Vian5g00806 132 Coils Coil 47 74 - -
Vian5g00806 132 FunFam BZIP transcription factor 29 81 - -
Vian5g00806 132 MobiDBLite consensus disorder prediction 1 24 - -
Vian5g00806 132 MobiDBLite consensus disorder prediction 25 53 - -
Vian5g00806 132 MobiDBLite consensus disorder prediction 1 53 - -
Vian5g00806 132 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Vian5g00806 132 Gene3D - 29 87 - -
Vian5g00806 132 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Vian5g00806 132 Pfam bZIP transcription factor 31 75 IPR004827 GO:0003700|GO:0006355
Vian5g00806 132 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00806 Vian-Chr5 27985142 27985540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00806 25 132 bZIP Transcription Factor Family AT4G34590 59.259 1.14e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian5g00806 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00806 K25786 - gmx:100101862 184.496