Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00784 ATGGCGTCTGGATCATCGGGTCGCGGAAACTCTGCCTCCAAAGGGTTTGATTTCGGTTCCGACGACATCCTCTGCTCCTACGATGACTACGCCAATCGCGATTCCAGTTCCAACGGCAATCACACGGATCCGGATTTTCACAAAGCAAGGATGCCGAGGACTCAAATGTTTACTGCTACTGCCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGTTTTCTAGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATACTGTTACAATCTTGACAAATCTATTGGAGAAATGAGATCAGATTTAACTCGTGACCATGTGGAGCAAGATTCAAGGCTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTGGCTGACACTCAGAAAGAATTGGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCACCCATTCACAGTCCAACGAGGAGAGATCATCACCAACCACAGATCCTAAAAAAACTGACAATGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCTCTACCTCATCAAATTTCCCCTCAGCAGCAGCCTGCAGCGCCTCCTGCTCAGGCTCAGGCACCTGCATCAAATGTGACTCAAGCCCCTCAGCAACCTCCTTATTACATGCCTCCCACCCCTCTGCAGAATACACCTGTGCCCCAGAACCAGTATTTGCCTTCTGATCAACAATATCGAACTCCCCAACTTTTGGCCCCACAACCAACACCATCTCAAGTAACACCGACCCCACCCGTGCAACAATTTTCTCACTATCAACAGCAACAGCCACAACCTCAACAACAACAGCAGCAGCTCCAGCAGCAACAACAGTGGTCACAGCAGGTGCCATCACCTCAGCCACCCTCAATGCAATCTCAAACAAGACCCCCCTCTCCAGCTATGTACCCTCCATACCAGCCGAACCAAGCAACAAACCCATCACCTGCAGAAACACTTCCAAACAGCATGCCCATGCAAGTGCCGTATTCAGGAGTTCCACCGCCAGGATCTAGCCGAGCTGACACAATACCATATGGATATGGAGGAGCTGGAAGAACAGTTCCACAACAGCCTCCACCCCAGCAGATGAAGGGTTCTTTTCCTGCACCACCAGGTGAGATGTATGGACCTACTGGTTCTCTCCCGGCCCTTCCTCCTCCTGGTAGTGCATACATGATGTATGAGGGTGAGGGAGGAAGAACGCATCATCCACCACAACCTCATTTTACTCAACCTGGATATCCTCCAACAAGTGGTTCCCTTCAGAACCCCCCAAGCCATAATCTAATGGTTCGAAATCCCAACCAGTCGCAGTTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGAGACCATGTTGTCAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAATTCGGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1602 0.4863 MASGSSGRGNSASKGFDFGSDDILCSYDDYANRDSSSNGNHTDPDFHKARMPRTQMFTATAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLTRDHVEQDSRLKSLEKHLQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSSTHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQISPQQQPAAPPAQAQAPASNVTQAPQQPPYYMPPTPLQNTPVPQNQYLPSDQQYRTPQLLAPQPTPSQVTPTPPVQQFSHYQQQQPQPQQQQQQLQQQQQWSQQVPSPQPPSMQSQTRPPSPAMYPPYQPNQATNPSPAETLPNSMPMQVPYSGVPPPGSSRADTIPYGYGGAGRTVPQQPPPQQMKGSFPAPPGEMYGPTGSLPALPPPGSAYMMYEGEGGRTHHPPQPHFTQPGYPPTSGSLQNPPSHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVVSVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGWSG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00784 533 Coils Coil 131 167 - -
Vian5g00784 533 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
Vian5g00784 533 MobiDBLite consensus disorder prediction 283 322 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 345 359 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 212 237 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 323 344 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 212 374 - -
Vian5g00784 533 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 533 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 165 197 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 432 451 - -
Vian5g00784 533 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00784 Vian-Chr5 27575965 27582225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00784 478 519 Trihelix Transcription Factor Family AT3G01560 40.476 9.80e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00784 - - gmx:100782994 795.808