Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00773 ATGGCGTTTCTGGGTCTCTTGTTTTCGATGATTCCTACGCTGCTTCTTCTTGCGTCATCATCAAAGTTTCAAGCTGAGGCAAGGCAGTATGATGTTGGTGGAAGAGATGGATGGGTGGCCAAGCCTTCCGAAGACTACAACCACTGGGCTCAGAGGAACAGATTTCAAGTCAACGATACTCTCCATTTCAAGTACAACAAAGGCATAGATTCAGTTGTGGTGGTGAAGAAGGAGGATTTCGATTCATGCAACATCAACAATCCCATTCAGAAAATGGACGATGGTGATTCAATTTTCCCACTTTCTCATTCGGGTCTCTTTTATTTCGTAAGTGGCAACCTTGACAACTGCAAAATCGGTCAAAAACTCATTGTTCTTGTCATGGCCGTCAGACAACCTCCTCCTGTGACTGCGCCGCCGCCTACAAGCGCCCTGCCGCCGCAGACTGTTCCGGCAACGGGGCTGACCTCTCCGGCACCGCCCCCGTCGGAGAAATCGGGCTCAGGGAGGGTTGGTGTGGGTTTGGGAGTTTTGGTTGGTTTTGTGTTGGTTGGGTTTATAGGGTTGGCTTAG 573 0.4974 MAFLGLLFSMIPTLLLLASSSKFQAEARQYDVGGRDGWVAKPSEDYNHWAQRNRFQVNDTLHFKYNKGIDSVVVVKKEDFDSCNINNPIQKMDDGDSIFPLSHSGLFYFVSGNLDNCKIGQKLIVLVMAVRQPPPVTAPPPTSALPPQTVPATGLTSPAPPPSEKSGSGRVGVGLGVLVGFVLVGFIGLA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00773 190 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Vian5g00773 190 PANTHER BLUE COPPER PROTEIN 28 137 IPR039391 GO:0009055
Vian5g00773 190 Pfam Plastocyanin-like domain 38 121 IPR003245 GO:0009055
Vian5g00773 190 MobiDBLite consensus disorder prediction 136 168 - -
Vian5g00773 190 Gene3D - 26 131 IPR008972 -
Vian5g00773 190 MobiDBLite consensus disorder prediction 136 158 - -
Vian5g00773 190 CDD OsENODL1_like 28 128 IPR041846 -
Vian5g00773 190 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Vian5g00773 190 FunFam Early nodulin-like protein 1 27 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00773 Vian-Chr5 27332369 27333255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00773 5 151 Phytocyanin Superfamily AT5G53870 49.664 2.13e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00773 - - vum:124829362 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00773 5 27332369 27333255 Vian5g00773 5 27332369 27333255 ECH