Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00768 ATGGTTTCAACTTCAGCATCTTGTTCCTTTACCATTAGTGTGTTATTCCTCATTTTTGTGCACCTGTCTTGTTTCGCAAACAACCTTAATGCAAAGCACAGTCACAACCATCGCAAGCCTCAACACACTGAGAATCCTCCCTTGAATCCAAGACTTCACATGGCCTTTCTTGGCCTCCAAGCATGGAAGCAAGTGATCTACTCAGACCCAAATAACTTCACTGCCAATTGGGTAGGTCCTTCAGTCTGCAACTACACAGGTGTGTACTGTGCTCCCTCAGTTGATGATCCTGAAGTGAGAGTTGTGGCTGGCATTGACCTTAACTTTGGAGACATAGCAGGGTTCCTACCCGATGAAATAGGCCTTCTGTCAGACCTTGCACTCCTTCACCTTAGTAACAACCGCTTCTGTGGCATTCTGCCAATGTCCTTAACCAACCTCACTCTACTCTATGAGCTTGATATTAGCAGCAACAGGTTTGTTGGTCCCTTTCCTTTGGTTTTGCTTTCCCTTCCTATGCTCACCTACCTTGACCTCCGCTACAATGAATTTGAAGGGCCATTGCCTCCTCAACTATTCAACAAAACCTTTGATGCCATTTTCCTCAACAACAACCGCTTCAGCAGTTCTATACCTCCAAACTTGGGCAAAAACTCAGTTTCTGTCTTGGTCTTTGCCAACAACAAATTTGGCGGGTGTCTTCCAGAGAGCATAGTGAACTTTGCTGACACTTTGGAGGAGCTTGTGCTAATCAACACTAGCTTGTCAGGTTGTTTGCCACAGCAAGTGGGGTTTCTCTACAAACTTAGAGTGCTGGATGTGAGTTTCAACAGCATTGTTGGCCCCATTCCTTATAGCCTTGCAGGGTTGTCTCACTTGGAGCAACTAAACCTGGGACACAACATGATGAGTGGCACTGTCCCTATGGGGGTTTGTGAGTTGCCAAACTTGGCAAACTTCACTTTCTCTTACAACTTCTTCTGTGAGGAAGAGGGCATCTGTCAGAACTTGACATCAAAGAGAATAGTGTTTGATGACAGAAGGAACTGTTTGCCAGAGAAGCCACTGCAGAGGAGCCAAAAGGAATGCAGTGCCAAACTTGAACACCCAGTTGATTGCTCTGAGCTTTGCTGTGTTGTTGGGAGCAATGTCTCTGCTGGTTCAGTGGCTGTTCCACCTGCTGCTATTCCCTCAGCAATGCCTGTATCTGCTCCTCTTCTTGCACCAAGCCACCCTTAA 1239 0.4633 MVSTSASCSFTISVLFLIFVHLSCFANNLNAKHSHNHRKPQHTENPPLNPRLHMAFLGLQAWKQVIYSDPNNFTANWVGPSVCNYTGVYCAPSVDDPEVRVVAGIDLNFGDIAGFLPDEIGLLSDLALLHLSNNRFCGILPMSLTNLTLLYELDISSNRFVGPFPLVLLSLPMLTYLDLRYNEFEGPLPPQLFNKTFDAIFLNNNRFSSSIPPNLGKNSVSVLVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNSIVGPIPYSLAGLSHLEQLNLGHNMMSGTVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLPEKPLQRSQKECSAKLEHPVDCSELCCVVGSNVSAGSVAVPPAAIPSAMPVSAPLLAPSHP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00768 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 383 - -
Vian5g00768 412 Gene3D Ribonuclease Inhibitor 218 377 IPR032675 -
Vian5g00768 412 SUPERFAMILY L domain-like 63 342 - -
Vian5g00768 412 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Vian5g00768 412 Gene3D Ribonuclease Inhibitor 57 217 IPR032675 -
Vian5g00768 412 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00768 Vian-Chr5 27238993 27240231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00768 49 378 Leucine-rich Repeat extension Gene Families AT3G24480 54.683 1.11e-133 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00768 - - gmx:100782629 723.776