Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00760 ATGACAGGAAAAGATATCCTCAATATGATGAAGGTGAAAGCAGGGTTTGGAACATCAACACCAGAGACAGGGAAAGGAAAAGGAAAAATATCAAAACATATTACACATGGCTTTCACTTGATGAAGGGAAAATCTGCACATCCCATGGAAGATTATTTAGTTTCAGAATTCAAGCAAGAAAAGGACAGAGAATTAGGCTTGTTTGCAATATTTGATGGCCACTTAGGCCACGATGTTGCGAGCTATTTGCAGAACCATCTTTTCCATAACATCTTGAAACAGCATGACTTTTGGAATGAGACAGAACACGCAGTGAAGAGGGCTTATATTGAAACTGATGAGAAAATATTGGAACAAGCACTTGAGTTGGGGCGAGGAGGATCAACAGCTGTAACTGCAATACTGATAGATGGTCAGAAGCTTGTAGTAGGAAATGTTGGTGACTCAAGAGCTGTTATTTGTGAGCATGGAAAGGCTAGGCAACTGTCTGTAGATCATGAACCAAGCAAGGAAAAGAAATCTATTGAGAGACGTGGAGGCTTTGTATCAAACATTCCAGGAGATGTCCCTCGAGTAGATGGACAGTTAGCAGTAGCAAGAGCTTTTGGTGATAGGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTTATAGAGGAAGTACTTCATCATACAGAGTTTCTTATTCTGGCCAGTGATGGAATATGGAAGGTAATGTCAAACCAAGAAGCAGTGGATTCCATTAGGCAAATAAAGGATGCTCAAGCTGCAGCAAAGCACTTGATAGAAGAAGCAGTTTCCAAGAAAAGTAAAGATGATATTTCTTGCATAGTTGTGAGATTCCAATGA 852 0.4014 MTGKDILNMMKVKAGFGTSTPETGKGKGKISKHITHGFHLMKGKSAHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFHNILKQHDFWNETEHAVKRAYIETDEKILEQALELGRGGSTAVTAILIDGQKLVVGNVGDSRAVICEHGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVFIEEVLHHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAVSKKSKDDISCIVVRFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00760 283 PANTHER PROTEIN PHOSPHATASE 31 282 IPR015655 GO:0004722|GO:0006470
Vian5g00760 283 SMART PP2C_4 24 280 IPR001932 -
Vian5g00760 283 Gene3D - 30 283 IPR036457 -
Vian5g00760 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Vian5g00760 283 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Vian5g00760 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Vian5g00760 283 SMART PP2C_SIG_2 40 282 IPR001932 -
Vian5g00760 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Vian5g00760 283 CDD PP2Cc 36 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00760 Vian-Chr5 27099112 27101350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00760 24 282 PP2C-type Phosphatase Gene Family AT4G28400 74.131 3.04e-143 401