Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00751 ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACCAAAGAGAGATGGAGGGTTTCTCGATGGCAGCAAAATCGGCATCAGATGATGATGACTTTCGTGAGCTTTCTGAAGGGAACTTATTGGAGAGCATCAACTTCGACGATCTCTTCGTCGGCATCGACGTTGGCGGAGATGTCTTGCCGGACTTGGAGATGTTTGGTGAGTTTTCCGTCAGCGCCGGGGAAGAGTCGTCGGAGATGAACTCATCAGCAGAGAACAGCAAGGAGGAGAATGATCGAAACTGTGTTCTGACTGTTTCAAAAAAGGAAGTAGAGGAAGACAAAAGTTCTTGTGCTGCTTCGGGTCAAGAGATAGTGAGCAAGAATGGTGAATCGGTGGTGGTGAATCCTGCGCCAAAAGAAGGTGGAAAAGGAAGAAAATCTTCATCGGCTCAGTTGAAGAATAATAGTAATAGTAATCATCCTCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTGCAAGCTGTGGAACAGCTAGGTGTGGACAAAGCAGTGCCTTCAAGGATTTTGGAGATTATGGGAATTAATTGTTTAACTCGTCATAACATTGCAAGCCACCTTCAAAAATATAGATCTCATCGGAAACACCTTCTGGCTCGTGAGGCTGAAGCAGCAAGTTGGAGTCAAAGGAGGCACATATATGGTGTTGGGAAGAGAGAGGTGAGTCCATGGCTAGCACCCACCATGGGATTCCCTCCTCCAATGACCACAATGCACCATTTTAGACCTCTACACGTGTGGGGGCACCCTTCCATGAACCATTCCTTCATGCACGTGTGGCCCAAACATCTTCCACCTTCACCACCACCACTCTCATGGCCATCACCTGCACCACCACAAGACCCTTCGTTTTGGCATCAACCGGCTCCAAATGCTCTAATACCAGGAACAGTTGGTTTCCCACAACCTCTGACACAAACGGGTTTTGGAACTCACCATGTCCCTGGCATCCCACCCCATGCCATGTACAAAGCAGATCACAGTATTGGCATCCATGGTCCTCGTCCTCTATTAGATTTTCACCCGTCAAAGGAGTGCATAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCCTTACCTCTTGGACTGAAGGCTCCAGCAATTGACAGTGTGATGAGTGAATTACAGAGACAAGGGATTCCAAACATTCCACCTTCCAGTGCTTGA 1248 0.4776 MLAVAPLRSIKDEKNQREMEGFSMAAKSASDDDDFRELSEGNLLESINFDDLFVGIDVGGDVLPDLEMFGEFSVSAGEESSEMNSSAENSKEENDRNCVLTVSKKEVEEDKSSCAASGQEIVSKNGESVVVNPAPKEGGKGRKSSSAQLKNNSNSNHPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGINCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRHIYGVGKREVSPWLAPTMGFPPPMTTMHHFRPLHVWGHPSMNHSFMHVWPKHLPPSPPPLSWPSPAPPQDPSFWHQPAPNALIPGTVGFPQPLTQTGFGTHHVPGIPPHAMYKADHSIGIHGPRPLLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPAIDSVMSELQRQGIPNIPPSSA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00751 415 MobiDBLite consensus disorder prediction 292 312 - -
Vian5g00751 415 Gene3D - 160 221 - -
Vian5g00751 415 MobiDBLite consensus disorder prediction 144 159 - -
Vian5g00751 415 MobiDBLite consensus disorder prediction 125 165 - -
Vian5g00751 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 219 IPR017930 -
Vian5g00751 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 163 217 IPR006447 GO:0003677
Vian5g00751 415 MobiDBLite consensus disorder prediction 1 33 - -
Vian5g00751 415 FunFam Two-component response regulator 159 222 - -
Vian5g00751 415 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 414 IPR044825 GO:0003700|GO:0045893
Vian5g00751 415 MobiDBLite consensus disorder prediction 75 98 - -
Vian5g00751 415 Pfam Myb-like DNA-binding domain 166 215 IPR001005 -
Vian5g00751 415 SUPERFAMILY Homeodomain-like 161 220 IPR009057 -
Vian5g00751 415 MobiDBLite consensus disorder prediction 292 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00751 Vian-Chr5 26868073 26872233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00751 1 356 G2-like Transcription Factor Family AT5G44190 39.276 6.29e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian5g00751 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00751 - - gmx:100777595 611.683