Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00738 ATGTACTTCACTGGAAAGACTAATTCGGGCCAATGCATAGAGAAAAGTGTAAGGAGAAACGAAGGAAAAGGAAATGATGAAGAACAACAAACAGAAGTAGAGCTTGAGAATCCAAAGAGTGAGGGACTGCTATATGACCGTTGTGCAAGGAAGAGAGGAAGGAGAAGGAGAAATGAAAGAAAGAAAAACGTAAGTGTCGTCGGCGCAACGTTGGTTTACGCGAAAGGATTCGCCGCCAGCATGGCGCCGAAAGCGCGGTTGGTGGTTTATAAAGTCTGCTGGATGGGCGGGTGCTACGGCTCCGACATCCTCGCCGCGTTCGATGCTGATTTGGCTGACGGTGTCGACGTGGTGTCGCTTAGCGTCGGAGGAGTGGTAGTGTCGTACCACCTCGACGAGATTGCGATTGGCGCCTTTGGCGCCACCTCGGCTGGCATGTTTGTCTCCTCCTCAACTAGCAATGGTAGTCCCGGTGGCCTCACAGTGACGAATGTGGCGCCGTGGGTTACCACTGTAGGCGCTAGAACTATAGACAGAGACTTTTCGGCGAGTCTTAAGCTTGAAAATGGAAAAATAATGCTCGGGATTAGTATTTATGGTGGACCTGGTTTAACTCCGACTCAGATGTACCCAATTGTGTATGGGGTGTTTCAACAATATGGAAAGAAGAGAATGTCTACACATTTTATCAGGACTATAACAAATGTCGGCGACCTTAATTCAGTTTACAAGGTCACCATCAAGCCACCAGGTGGGATGGTGGTCACAGTGAAACTAGACACCCTGACTTTCAGGAAGATTGGTCAGAAATTGAACTTTCTTGTTAGGGTACAAACTAGGGCTATTAAGCTTACACCTGGAAGTTCTAGTGTCAAGAGTGGTTTCATAGTTTGGTCTGATGGGAAACATACTGTGACAAGCCCTTTGGTTGTCGCAGTGCAGCAACCTCTGGATTAG 957 0.4786 MYFTGKTNSGQCIEKSVRRNEGKGNDEEQQTEVELENPKSEGLLYDRCARKRGRRRRNERKKNVSVVGATLVYAKGFAASMAPKARLVVYKVCWMGGCYGSDILAAFDADLADGVDVVSLSVGGVVVSYHLDEIAIGAFGATSAGMFVSSSTSNGSPGGLTVTNVAPWVTTVGARTIDRDFSASLKLENGKIMLGISIYGGPGLTPTQMYPIVYGVFQQYGKKRMSTHFIRTITNVGDLNSVYKVTIKPPGGMVVTVKLDTLTFRKIGQKLNFLVRVQTRAIKLTPGSSSVKSGFIVWSDGKHTVTSPLVVAVQQPLD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00738 318 Gene3D Peptidase S8/S53 domain 66 177 IPR036852 GO:0004252|GO:0006508
Vian5g00738 318 Gene3D - 178 216 - -
Vian5g00738 318 MobiDBLite consensus disorder prediction 1 15 - -
Vian5g00738 318 SUPERFAMILY Subtilisin-like 76 215 IPR036852 GO:0004252|GO:0006508
Vian5g00738 318 MobiDBLite consensus disorder prediction 1 36 - -
Vian5g00738 318 MobiDBLite consensus disorder prediction 16 36 - -
Vian5g00738 318 Pfam Subtilase family 78 251 IPR000209 GO:0006508|GO:0008236
Vian5g00738 318 Pfam Fibronectin type-III domain 222 311 IPR041469 -
Vian5g00738 318 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 228 311 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00738 Vian-Chr5 26578814 26580141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00738 210 317 Subtilisin-like Serine Gene Family AT3G14240 62.037 1.53e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00738 - - gsj:114418214 210.305