LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian5g00738	ATGTACTTCACTGGAAAGACTAATTCGGGCCAATGCATAGAGAAAAGTGTAAGGAGAAACGAAGGAAAAGGAAATGATGAAGAACAACAAACAGAAGTAGAGCTTGAGAATCCAAAGAGTGAGGGACTGCTATATGACCGTTGTGCAAGGAAGAGAGGAAGGAGAAGGAGAAATGAAAGAAAGAAAAACGTAAGTGTCGTCGGCGCAACGTTGGTTTACGCGAAAGGATTCGCCGCCAGCATGGCGCCGAAAGCGCGGTTGGTGGTTTATAAAGTCTGCTGGATGGGCGGGTGCTACGGCTCCGACATCCTCGCCGCGTTCGATGCTGATTTGGCTGACGGTGTCGACGTGGTGTCGCTTAGCGTCGGAGGAGTGGTAGTGTCGTACCACCTCGACGAGATTGCGATTGGCGCCTTTGGCGCCACCTCGGCTGGCATGTTTGTCTCCTCCTCAACTAGCAATGGTAGTCCCGGTGGCCTCACAGTGACGAATGTGGCGCCGTGGGTTACCACTGTAGGCGCTAGAACTATAGACAGAGACTTTTCGGCGAGTCTTAAGCTTGAAAATGGAAAAATAATGCTCGGGATTAGTATTTATGGTGGACCTGGTTTAACTCCGACTCAGATGTACCCAATTGTGTATGGGGTGTTTCAACAATATGGAAAGAAGAGAATGTCTACACATTTTATCAGGACTATAACAAATGTCGGCGACCTTAATTCAGTTTACAAGGTCACCATCAAGCCACCAGGTGGGATGGTGGTCACAGTGAAACTAGACACCCTGACTTTCAGGAAGATTGGTCAGAAATTGAACTTTCTTGTTAGGGTACAAACTAGGGCTATTAAGCTTACACCTGGAAGTTCTAGTGTCAAGAGTGGTTTCATAGTTTGGTCTGATGGGAAACATACTGTGACAAGCCCTTTGGTTGTCGCAGTGCAGCAACCTCTGGATTAG	957	0.4786	MYFTGKTNSGQCIEKSVRRNEGKGNDEEQQTEVELENPKSEGLLYDRCARKRGRRRRNERKKNVSVVGATLVYAKGFAASMAPKARLVVYKVCWMGGCYGSDILAAFDADLADGVDVVSLSVGGVVVSYHLDEIAIGAFGATSAGMFVSSSTSNGSPGGLTVTNVAPWVTTVGARTIDRDFSASLKLENGKIMLGISIYGGPGLTPTQMYPIVYGVFQQYGKKRMSTHFIRTITNVGDLNSVYKVTIKPPGGMVVTVKLDTLTFRKIGQKLNFLVRVQTRAIKLTPGSSSVKSGFIVWSDGKHTVTSPLVVAVQQPLD	318

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian5g00738	318	Gene3D	Peptidase S8/S53 domain	66	177	IPR036852	GO:0004252\|GO:0006508
	Vian5g00738	318	Gene3D	-	178	216	-	-
	Vian5g00738	318	MobiDBLite	consensus disorder prediction	1	15	-	-
	Vian5g00738	318	SUPERFAMILY	Subtilisin-like	76	215	IPR036852	GO:0004252\|GO:0006508
	Vian5g00738	318	MobiDBLite	consensus disorder prediction	1	36	-	-
	Vian5g00738	318	MobiDBLite	consensus disorder prediction	16	36	-	-
	Vian5g00738	318	Pfam	Subtilase family	78	251	IPR000209	GO:0006508\|GO:0008236
	Vian5g00738	318	Pfam	Fibronectin type-III domain	222	311	IPR041469	-
	Vian5g00738	318	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	228	311	IPR045051	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian5g00738	Vian-Chr5	26578814	26580141	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian5g00738	210	317	Subtilisin-like Serine Gene Family	AT3G14240	62.037	1.53e-40	149

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian5g00738	-		-	gsj:114418214	210.305

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