Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00731 ATGGAGTGCAAGAGTGAAGAGCGTATCTCAAAACTCCTTGGAGCTCAAACCCATGTTTGGAATCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGATTTGGACATACCTGACATCATACACAAGCATGGTGAACCCATGCCACTCTCAAAACTCACTGCTTCAGTATCACTCCATCCTTCCAAAGCCAACTGCATCTACCGGTTGATGCGAATCTTGACCCATTCTGGCTTCTTCTCTGAAGTCAAGGTGAACGAGAATGACCTTGAAGTGGGTTATGTGTTGACTGATGCATGCACTCTATTACTTAAGGACAACCCCTTGAGTATGACACCTTTCTTGCATGCCATGCTTGATCCAATTTTGACAAAGCCGTGGCATGAATTGGCTACATGGTTCAGGAATGATGATCCCTCGCCATTCCACACAGCACATGGGATGAAAATCTGGGACTACGCTGGGCGTGATCCAAAACTGAATCATCTTTTCAATGATGCGATGGCAAGTGACGCTGAATTGGTTGGCAACGTGGTTATTGAGAGGTGTGGGGGAGTGTTCAAGGGGTTGGAGTCAGTTGTTGATGTTGGTGGAGGCACAGGTACCATGGCAAAGGCAATTGCCAAATCATTCCCTCACTTAGACTGCACCGTGTTTGATCTCCCACATGTTGTTGCCGACTTATAA 696 0.4583 MECKSEERISKLLGAQTHVWNHIFSFINSMSLKCAIDLDIPDIIHKHGEPMPLSKLTASVSLHPSKANCIYRLMRILTHSGFFSEVKVNENDLEVGYVLTDACTLLLKDNPLSMTPFLHAMLDPILTKPWHELATWFRNDDPSPFHTAHGMKIWDYAGRDPKLNHLFNDAMASDAELVGNVVIERCGGVFKGLESVVDVGGGTGTMAKAIAKSFPHLDCTVFDLPHVVADL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00731 231 Gene3D Vaccinia Virus protein VP39 107 231 IPR029063 -
Vian5g00731 231 PANTHER O-METHYLTRANSFERASE 16 230 IPR016461 GO:0008168
Vian5g00731 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 229 IPR029063 -
Vian5g00731 231 Gene3D - 2 106 IPR036388 -
Vian5g00731 231 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Vian5g00731 231 FunFam - 110 230 - -
Vian5g00731 231 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 231 IPR016461 GO:0008168
Vian5g00731 231 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Vian5g00731 231 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Vian5g00731 231 Pfam O-methyltransferase domain 130 229 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00731 Vian-Chr5 26347999 26348694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00731 30 230 Monolignol Biosynthesis Gene Families AT5G54160 32.683 1.81e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00731 - K16040 gmx:100794122 407.912