Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00729 ATGGTCAAAGTGAGCGTTTTCACCGTTCCACAGTCGTTTGACCGTTCTTTTGGGAACTCTTTAGTTGTTGTTCGGTGTGTTCTTAGTCACCCTGATGTTGTTGCCCTTGAAGAATGGATTAGCATAAAAGGTTTTTTCACTAAGGAAAGCTTTATCCCAAAATTTCATATTCCATGTGATGAAGAAATTCATTTTGCAAATGAGCTAATAGACATTCACTTCCAGTCAGCTTTGGATGATCAGTTGAAAATATGCCAGTCTAAAATCCATGCAGACCAAGATGAGCGGATAAAGGTGTTGCAAGAGAAGCTCTCCGCTGCAGAGGAGAAACTGCAGGTTTCTGAAATATCTGCAAATGAGACAAGAACAGAATTTGAAGGTCAACAAAAGCTTGTACATGAGTTGCAAAGGCGTTTGGAAGATGCAGAATATAAAGTTACAATAGGGGAGAAACTGAGGAAAGAATTGCACAATACGATTTTGGAACTAAAAGGGAACATCCGTGTGTTCTGTAGAGTACGACCTTTGTTACCTGATGAGGCTTGTAGCACAGAAGGAAAGGTTATATCTTATCCCACATCGATGGAAGCATCTGGACGGGGCATCGAATTGACACAAAGTGGAGGAACTGCAATAGGTTAG 642 0.4081 MVKVSVFTVPQSFDRSFGNSLVVVRCVLSHPDVVALEEWISIKGFFTKESFIPKFHIPCDEEIHFANELIDIHFQSALDDQLKICQSKIHADQDERIKVLQEKLSAAEEKLQVSEISANETRTEFEGQQKLVHELQRRLEDAEYKVTIGEKLRKELHNTILELKGNIRVFCRVRPLLPDEACSTEGKVISYPTSMEASGRGIELTQSGGTAIG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00729 213 Coils Coil 90 145 - -
Vian5g00729 213 Gene3D Kinesin motor domain 108 207 IPR036961 -
Vian5g00729 213 ProSiteProfiles Kinesin motor domain profile. 166 213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g00729 213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 188 IPR027417 -
Vian5g00729 213 PANTHER KINESIN-LIKE PROTEIN KLP-3 96 191 IPR027640 GO:0003777|GO:0007018
Vian5g00729 213 Pfam Microtubule binding 150 186 IPR031852 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00729 Vian-Chr5 26255821 26258235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00729 152 190 Calmodulin-binding Proteins AT5G65930 46.154 6.15e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00729 K10405 - var:108340031 401.749