Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian5g00726 | ATGAGTTTTGATAACGAAGATCATTCTTCCAAACTACTTGAAGCTCAAACCCACATATTTAACCAAACTTTTGGTTTCATAAACTCTATGTCCCTTAAATGTGCAATTGATCTGTGCATTCCTGATGTCATACACAACTATGGCCAATCTATGCCACTCTCAAAACTCATTGCTTCACTTCCAATTCACCCTTCCAAGACTTGCTTTGTTTCCCGTTTGATGCAAATCTTGGTCCATTCTGGTTTTTTCTCTCAACACAGTGATGATAGTAAGCAAGAAGTGAGCTATGCGCTAACTGATGCATCAGCACTTCTCCTTAAGGAGCACCCTTTTAGTATGACATGTTTGCCACAAGTGATACTTGATCCAATTTTGGTGAATCCATGGTTTCAGTTCTCCACTTGGTTCACAAATGATGAGCCTACACCATTTCACACACAGAATGGGATGACTTTTTGGGACTATGCTGGCCGTGAGCCCAAACTCAACCACCTTTTCAATGATGCCATGACAAATGACACTCGATTGATTTCCAGTGTGATGATTGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGGACAGGAACCATGGCTAAGGCCATTGCCAAGTCTTTTCCACACTTGAAGTGTACTGTTTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACAGATAACATAGAATATGTTGGAGGGGACATGTTTCAAGCAATCCCTTCTGCTGATTCCATCATGCTCAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGAAAAGAAAGATAAAGGAAAAGTGATTATCATAGACGTGGTGATAGGAAACCTGAAAGGGGACAGTGTATTGGATCAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAAGAGAGAAATGAGAAAGATTGGGCTAAGTTGTTTTTTTCTGCAGGCTTTAATCACTATAAGATAACTCCAGTTCTAGGTTTCAAGTCTCTCATAGAGGTTTATCCATAG | 1068 | 0.4064 | MSFDNEDHSSKLLEAQTHIFNQTFGFINSMSLKCAIDLCIPDVIHNYGQSMPLSKLIASLPIHPSKTCFVSRLMQILVHSGFFSQHSDDSKQEVSYALTDASALLLKEHPFSMTCLPQVILDPILVNPWFQFSTWFTNDEPTPFHTQNGMTFWDYAGREPKLNHLFNDAMTNDTRLISSVMIEKCKGVLEGLESLVDVGGGTGTMAKAIAKSFPHLKCTVFDLPHVVHGLQGTDNIEYVGGDMFQAIPSADSIMLKTIMHNWNDEECLKILKRCKEAIEKKDKGKVIIIDVVIGNLKGDSVLDQTKLYYDMEMMVLVTGKERNEKDWAKLFFSAGFNHYKITPVLGFKSLIEVYP | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian5g00726 | 355 | PANTHER | O-METHYLTRANSFERASE | 13 | 340 | IPR016461 | GO:0008168 | |
Vian5g00726 | 355 | CDD | AdoMet_MTases | 195 | 293 | - | - | |
Vian5g00726 | 355 | PIRSF | O-mtase | 1 | 355 | IPR016461 | GO:0008168 | |
Vian5g00726 | 355 | Pfam | Dimerisation domain | 30 | 78 | IPR012967 | GO:0046983 | |
Vian5g00726 | 355 | Pfam | O-methyltransferase domain | 129 | 337 | IPR001077 | GO:0008171 | |
Vian5g00726 | 355 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 20 | 355 | IPR016461 | GO:0008168 | |
Vian5g00726 | 355 | FunFam | O-methyltransferase ZRP4 | 107 | 355 | - | - | |
Vian5g00726 | 355 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 110 | 354 | IPR029063 | - | |
Vian5g00726 | 355 | Gene3D | Vaccinia Virus protein VP39 | 106 | 355 | IPR029063 | - | |
Vian5g00726 | 355 | Gene3D | - | 2 | 105 | IPR036388 | - | |
Vian5g00726 | 355 | SUPERFAMILY | "Winged helix" DNA-binding domain | 9 | 110 | IPR036390 | - | |
Vian5g00726 | 355 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 2 | 105 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian5g00726 | Vian-Chr5 | 26068987 | 26070259 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian5g00726 | 30 | 341 | Monolignol Biosynthesis Gene Families | AT5G54160 | 32.288 | 1.04e-49 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian5g00726 | - | K16040 | gmx:100793263 | 623.239 |