Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00726 ATGAGTTTTGATAACGAAGATCATTCTTCCAAACTACTTGAAGCTCAAACCCACATATTTAACCAAACTTTTGGTTTCATAAACTCTATGTCCCTTAAATGTGCAATTGATCTGTGCATTCCTGATGTCATACACAACTATGGCCAATCTATGCCACTCTCAAAACTCATTGCTTCACTTCCAATTCACCCTTCCAAGACTTGCTTTGTTTCCCGTTTGATGCAAATCTTGGTCCATTCTGGTTTTTTCTCTCAACACAGTGATGATAGTAAGCAAGAAGTGAGCTATGCGCTAACTGATGCATCAGCACTTCTCCTTAAGGAGCACCCTTTTAGTATGACATGTTTGCCACAAGTGATACTTGATCCAATTTTGGTGAATCCATGGTTTCAGTTCTCCACTTGGTTCACAAATGATGAGCCTACACCATTTCACACACAGAATGGGATGACTTTTTGGGACTATGCTGGCCGTGAGCCCAAACTCAACCACCTTTTCAATGATGCCATGACAAATGACACTCGATTGATTTCCAGTGTGATGATTGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGGACAGGAACCATGGCTAAGGCCATTGCCAAGTCTTTTCCACACTTGAAGTGTACTGTTTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACAGATAACATAGAATATGTTGGAGGGGACATGTTTCAAGCAATCCCTTCTGCTGATTCCATCATGCTCAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGAAAAGAAAGATAAAGGAAAAGTGATTATCATAGACGTGGTGATAGGAAACCTGAAAGGGGACAGTGTATTGGATCAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAAGAGAGAAATGAGAAAGATTGGGCTAAGTTGTTTTTTTCTGCAGGCTTTAATCACTATAAGATAACTCCAGTTCTAGGTTTCAAGTCTCTCATAGAGGTTTATCCATAG 1068 0.4064 MSFDNEDHSSKLLEAQTHIFNQTFGFINSMSLKCAIDLCIPDVIHNYGQSMPLSKLIASLPIHPSKTCFVSRLMQILVHSGFFSQHSDDSKQEVSYALTDASALLLKEHPFSMTCLPQVILDPILVNPWFQFSTWFTNDEPTPFHTQNGMTFWDYAGREPKLNHLFNDAMTNDTRLISSVMIEKCKGVLEGLESLVDVGGGTGTMAKAIAKSFPHLKCTVFDLPHVVHGLQGTDNIEYVGGDMFQAIPSADSIMLKTIMHNWNDEECLKILKRCKEAIEKKDKGKVIIIDVVIGNLKGDSVLDQTKLYYDMEMMVLVTGKERNEKDWAKLFFSAGFNHYKITPVLGFKSLIEVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00726 355 PANTHER O-METHYLTRANSFERASE 13 340 IPR016461 GO:0008168
Vian5g00726 355 CDD AdoMet_MTases 195 293 - -
Vian5g00726 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Vian5g00726 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Vian5g00726 355 Pfam O-methyltransferase domain 129 337 IPR001077 GO:0008171
Vian5g00726 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Vian5g00726 355 FunFam O-methyltransferase ZRP4 107 355 - -
Vian5g00726 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Vian5g00726 355 Gene3D Vaccinia Virus protein VP39 106 355 IPR029063 -
Vian5g00726 355 Gene3D - 2 105 IPR036388 -
Vian5g00726 355 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Vian5g00726 355 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00726 Vian-Chr5 26068987 26070259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00726 30 341 Monolignol Biosynthesis Gene Families AT5G54160 32.288 1.04e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00726 - K16040 gmx:100793263 623.239