Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00723 ATGATGAGAGAAAGTTCCAAGGGCAAGTTTGGATCCTCTTCTATTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAGCAATCTTCAGTGTGCAAGAAAAGAGGGCAGGGGTAGTGACATTGTGATCTTTGAGGAGCAGATGCATCAGCTTCTCCGCGAGTGGAAGGCGGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAGTGAACTTGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCATTAACAAAACCTGGGCCGTTGAAGACTGAGCTCCAAACAAGTAACATTAATGACAACAATTTTCAGTTTTTTCAGGAGAAACATTTTGATGATAACCAACCTCTAGGTCATAATTTCGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAACTCAGATATGGAACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGATTGGTCAGGTGGATTTATATCAGGACCTCGGGCATAACACAGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGATACTGTGCATCATGGAGAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCAGGAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAAGGTCTTCCTGGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCGAAGACCCAGGGAAAGGAAGTGGGCATCCCCAGTTGTGAAGGCGCCGCATCAACTAAATCTCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAGCTATTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAAAGATCACTTCCAGATTACAGCGGACGCGGTTGGCATGAGTCAAGGAAGCAGGTGATGAAAGAACATGGAGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTGGAGTGGCATTTGTACGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTTGAGAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCATCTGATGATGGAATACCCATCAAGGGAAAAACAAATGCCAAGTCTGAGAATGATGGATCTCCAGAAAATTAA 1449 0.4244 MMRESSKGKFGSSSIQSMKEKEKHLVDKIQGIFSNLQCARKEGRGSDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNINDNNFQFFQEKHFDDNQPLGHNFEGSASTLYNNAFNNSDMEQLDFHPFSLNQDMNHNQVGHNSDLIGQVDLYQDLGHNTEIKHSESNQFSIEGFDCSQFFGAEDTVHHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGEAIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVEKKKSPKGKVTKESLNDLQNKMGQLTAAVLSSDDGIPIKGKTNAKSENDGSPEN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00723 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Vian5g00723 482 MobiDBLite consensus disorder prediction 460 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00723 Vian-Chr5 26006968 26009740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00723 1 455 VOZ-9 Transcription Factor Family AT1G28520 51.310 5.39e-156 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vian5g00723 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00723 - - vra:106755121 984.556