Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00684 ATGGCAGCTCATGAAGTACCTCTGAGTTATAGTGGGGCACAACCTGTTGAAGCAGCAACAGGGGAATCGGGTGCTGCTGGAGAAGCTTTTCTGTGGGAGCTATTCGGGACAGTCACATATTTTTCAACCCCAGTATGGACAATACTGTCCGCTACTGCCTTAACTTGGATTGGGTGGTTTCCATTTCTCCTTTTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAACCAAATGAAGGCCCTAATTATGATACTGGAGTTAGAATGGGGGCAATAGGCTTATTGCTTAATTCAGTTGTTCTTGGAATAACGTCTGTACTCATGGAGAGGTTATGCAGGAAGCGGGGGGCTGGGTTTGTGTGGGGAATCTCAAATATCTTGATGGCTGTCTGCTTTATTGCAATGCTTATTGTAACCTATCTGGCAAATAGAATTGGCTATATAGGCAAAGAACTACCACCAACTGGCATTGTGATTGCTGCATTGACAATCTTTACCGTTCTTGGGTTTCCACTTGCAATCACTTACAACGTTCCATATGCCTTAGTTTCCACACATATTTAG 570 0.4404 MAAHEVPLSYSGAQPVEAATGESGAAGEAFLWELFGTVTYFSTPVWTILSATALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDTGVRMGAIGLLLNSVVLGITSVLMERLCRKRGAGFVWGISNILMAVCFIAMLIVTYLANRIGYIGKELPPTGIVIAALTIFTVLGFPLAITYNVPYALVSTHI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00684 189 SUPERFAMILY MFS general substrate transporter 25 186 IPR036259 -
Vian5g00684 189 PANTHER SUGAR TRANSPORTER 3 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00684 Vian-Chr5 25028319 25029315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00684 2 189 Sucrose Transporter Gene Family AT1G09960 66.489 2.28e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00684 K15378 - var:108323303 349.747