Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00659 ATGATGTCAAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGAGGGAGTCTAGGGAGAGGAGGCGGATGCCGAGGGTTATGAGTGTTCCAGGGTTTCTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAACCCGTCGACAATTACTACGGATAGAATGATCATTGTGGCTAACCAGTTACCATTGAAGGCAAAGCGAAGAGAGGACAACAAAGGGTGGTCTTTCAGTTGGAATGAAGATTCGTTACTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGTTCCTTACGCGTTGATATTGATCCAGCAGAACAGGATGACGTGTCTCAGAATTTGTTGGATAAATTCAAATGTGTTCCGACTTTTTTACCTGCTGACGTTTTGGCAAAATTTTATGATGGTTTTTGTAAAAGGCAGTTGTGGCCACTTTTTCATTACATGTTACCATTTTCAACTGACAAAAGCCATCGATTTGATCGCACTTTGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAGAAGGTAGTTGAAATAATAAACCCTGAGGATGATTACATTTGGATTCATGATTATCATTTGATGGTGCTGCCTACTTTTATTAGAAGGCGTTTTAACCGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAGATTTATAGGACTCTTCCTGTAAGGGAAGAGATACTGAAAGCTTTGCTAAACTCTGATATCATCGGATTCCATACCTTCGACTATGCTCGTCATTTCCTTTCCTGCTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCTAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGTATTCACATGGGTCGGATTGATTCAGTCATGAGAATGGCAGTTGAGGAGACCAAGGTTAAGGAGCTCAAACAGAAATTTGAAGGTAAAACCATCTTACTTGGTGTTGATGACATGGACATTTTTAAAGGAATAAATTTGAAGATTTTGGCAATGGAGCAGATGCTCAGACAGCACCCTAAATGGCAAGGAAGAGCTGTTCTGGTCCAAATAGTTAATCCTGCTAGAGGGAAAGGGATACATCTGGAGGAGATACATGCTGAAATACAAGAAAGCTGCACTAGGATCAACAGAGTGTTTGGGCGGCCTGGTTATGAACCTATTGTTTTTATAGATAGAGCAGTATCTATTGCTGAAAAAGTTGCCTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGAATCATGTTCCAATGCCAGTGACCCAAAGAAGAGTATGCTGGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCCATCTCAATGAGTGATGGGGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTACTGGTCACGTAGTTTTTTGCAAGACATGGAGCGGGCTTGCACAGACCTTCTAAGGAAGAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGATCCTAATTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCGCAGAACTCCATTAACAAGAGTCCAAGCAAGGAGGTCTTGTCTATTATGGAATCACTTAGTGCAGACCCAAAAAATATTGTTTTTATTGTTAGTGGAAGGGGGAGAGAGAGCTTAAGTGAGTGGTTTGCTCCCTGCAGGAAACTTGGAATTGCCGCAGAACATGGGTACTTCTTGAGATGGGGCCACAATGGAGAATGGGAAATTTGTGGTAAGTCCTCCGACTTTGGATGGATGCAGATAGCTGAACCTGTGATGAAACTATATACTGAGGCAACTGATGGCTCCTCAATCGAAAGAAAAGAAAGTGCTTTAGTCTGGCAGTACCGTGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCCGTGAAGAGTGGCCAGTTTATTGTTGAAGTAAAACCACAGGATGTGAGCAAAGGTTTGGTGGCCGAAAGGATATTTTCGTCAATGGACGGGAAAGGCAAGCAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATTTCAAGGAATATTCTTGCCTCCAATGCTTCTGTGTTTGCTTGCACAGTTGGACAAAAGCCAAGCAAAGCAAAGTATTATCTGGATGATACAACCGAGGTAACAAGCATGCTAGAATCTTTGGCCGAAGAATCAGATTCTTCACCCTGCATACAAGAAACTGGGGATTCCTCTCGGAGGCAAGTATCAGTTCAGGTTTCTCTGATTTAG 2607 0.4231 MMSRSYTNLLDLASGNFPAMGRESRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTITTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQNLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIDSVMRMAVEETKVKELKQKFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIHAEIQESCTRINRVFGRPGYEPIVFIDRAVSIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISDSESCSNASDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPKNIVFIVSGRGRESLSEWFAPCRKLGIAAEHGYFLRWGHNGEWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMDGKGKQADFVLCVGDDRSDEDMFEIVSSAISRNILASNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIQETGDSSRRQVSVQVSLI 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00659 868 SUPERFAMILY HAD-like 593 841 IPR036412 -
Vian5g00659 868 NCBIfam trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Vian5g00659 868 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Vian5g00659 868 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Vian5g00659 868 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Vian5g00659 868 NCBIfam HAD-IIB family hydrolase 595 799 IPR006379 -
Vian5g00659 868 Gene3D - 592 693 IPR023214 -
Vian5g00659 868 Gene3D - 721 851 IPR023214 -
Vian5g00659 868 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Vian5g00659 868 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Vian5g00659 868 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Vian5g00659 868 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Vian5g00659 868 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Vian5g00659 868 Gene3D Glycogen Phosphorylase B; 317 530 - -
Vian5g00659 868 Gene3D Glycogen Phosphorylase B; 56 316 - -
Vian5g00659 868 CDD HAD_TPP 594 833 - -
Vian5g00659 868 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Vian5g00659 868 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00659 Vian-Chr5 23861687 23865449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00659 1 847 Trehalose Biosynthesis Gene Families AT1G06410 78.749 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00659 K16055 - gmx:100800847 1633.62