Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00636 ATGGCAGACGACGTCGTTCTGCTAGATTTCTGGCCGAGTCCTTTTGGGATGAGGGTGAGGGTTGCACTTGCTGAAAAAGGTATAAAGTATGAGCGCAAAGAAGAGGATCTGAAGAACAAGAGTTCTTTACTCCTACGAATGAACCCGGTTCACAAGAAAATTCCGGTTCTTATCCACAACGGCAAACCCATCTGTGAATCTCTCATTATTGTTCAATACATTGAGGATGTTTGGAATCACACAAATCCCTTGCTGCCTTCTGACCCTTACCAGAGAGCACAGGCAAGATTTTGGGCTGATTATGTTGACACTAAGATAGTTAATACCTTAGAGAAGATTTCGAAAGGAAAAGGAGAAGAAAGAGAAGTTGCAAAGAAAGAGTTGATAGAAGCCCTTAAATTGTTGGAGGAAGAAGTGGGAGATAAAAGTTATTTTGGAGGAGAAAATCTTGGTTTTGTGGACATAGCACTTGTCTCATTCTACCCTTGGATAAAATCCTTTGCAACTTTTGTCACTCTTAACATAGATGCTGAGTGTCCTAAGTTGATTGCTTGGGCCAAGAGGTGCCTTCAAAAAGAAAGTGTTGCTAAGTCTCTTCCTGGTGAGCAGGTGATCAATGAGTTCACAACAAAGATCTTCAGCATTGAGTAG 651 0.4147 MADDVVLLDFWPSPFGMRVRVALAEKGIKYERKEEDLKNKSSLLLRMNPVHKKIPVLIHNGKPICESLIIVQYIEDVWNHTNPLLPSDPYQRAQARFWADYVDTKIVNTLEKISKGKGEEREVAKKELIEALKLLEEEVGDKSYFGGENLGFVDIALVSFYPWIKSFATFVTLNIDAECPKLIAWAKRCLQKESVAKSLPGEQVINEFTTKIFSIE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00636 216 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Vian5g00636 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vian5g00636 216 Pfam Glutathione S-transferase, C-terminal domain 115 192 IPR004046 -
Vian5g00636 216 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Vian5g00636 216 CDD GST_N_Tau 5 78 - -
Vian5g00636 216 FunFam Glutathione S-transferase U20 88 215 - -
Vian5g00636 216 Gene3D - 88 216 - -
Vian5g00636 216 Pfam Glutathione S-transferase, N-terminal domain 6 75 IPR004045 -
Vian5g00636 216 SFLD Glutathione Transferase (cytosolic) 2 211 IPR040079 -
Vian5g00636 216 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Vian5g00636 216 FunFam Tau class glutathione S-transferase 1 87 - -
Vian5g00636 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 200 IPR045073 -
Vian5g00636 216 Gene3D Glutaredoxin 1 87 - -
Vian5g00636 216 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vian5g00636 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00636 Vian-Chr5 22985488 22986982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00636 1 212 Glutathione S-transferase Gene Family AT1G78380 60.849 2.79e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00636 K00799 - gmx:547520 339.732