Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00632 ATGGACTTTTCCCTCCATGCGAAACACGAACCAGAGTTGGAGAAGAGGAAAAGGGGGTTCACGCCTTCCTCACTACGAGTCGAAACGAAACGAGAAGAAAAGAAAAAGATAAAGATGGGTGCTTCCCCCTTCTTGTGCAGCCGCGACAGAGGAGTGAAGAAGAAAACAAAACATTGCGCGAAGAGAACCCCAAGGGCGAGAGAGAGCATCGGCGCAAAACCTAAACGAAGGCTTCATCCTGTATCTGTGGTTCCCCGCATCCGTTTGGTTCCCCGCATCACAATCTTCAAACAATTTTCGTGTTGGTTCCCCGCATCCGTGTGGCTTCGTGTTGGTTCCTTGCTTGGAAACGAGGCTGCATGTGTTGCGCTGAAAGAAATAGAGGTGGAGTGTGAGTTTTTGAAGAGGTGGTGTGAGAATCTGACGGAGGAGAACAAAAGGAAGTGCAAGAGCTCAGCGTATTTTCTTGTCCTTGATGACATTATGGATAATTCTCACACACGTAGGGGTCAACCATGCTGGTTTAGAGTGCCCGAGAATCTGGAAAACCATGTTGATGTGAAGAACATTCTTGTTGAGATGGGAACCTACTTTCAAGTACCGATAGGTACAGATATTGAAGATTTTAAATGCTCTTGGTTAGTTGCGAAAGCTTTGAAGCTTAGCAATTAG 672 0.4643 MDFSLHAKHEPELEKRKRGFTPSSLRVETKREEKKKIKMGASPFLCSRDRGVKKKTKHCAKRTPRARESIGAKPKRRLHPVSVVPRIRLVPRITIFKQFSCWFPASVWLRVGSLLGNEAACVALKEIEVECEFLKRWCENLTEENKRKCKSSAYFLVLDDIMDNSHTRRGQPCWFRVPENLENHVDVKNILVEMGTYFQVPIGTDIEDFKCSWLVAKALKLSN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00632 223 Gene3D Farnesyl Diphosphate Synthase 151 187 IPR008949 -
Vian5g00632 223 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 153 179 IPR039702 GO:0008299|GO:0016765
Vian5g00632 223 SUPERFAMILY Terpenoid synthases 153 222 IPR008949 -
Vian5g00632 223 ProSitePatterns Polyprenyl synthases signature 1. 156 170 IPR033749 -
Vian5g00632 223 Coils Coil 124 144 - -
Vian5g00632 223 SMART halz 125 168 IPR003106 GO:0006355|GO:0043565
Vian5g00632 223 MobiDBLite consensus disorder prediction 1 35 - -
Vian5g00632 223 Pfam Polyprenyl synthetase 153 177 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00632 Vian-Chr5 22866304 22875611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00632 117 147 Homeobox Transcription Factor Family AT4G16780 64.516 4.02e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00632 K00787 - aew:130790462 76.2553