Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00609 ATGGCCACATTCATCTTTAGGTCTAACAAAGCAGTGCATGCCTTTGTTGGCTGTCTTTGTCTTCTGCTGATGGTTCAAAAGGGTGCTTCCTATGATTTTGTAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCCAATGATCCCACTTTCAATCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTCAAGTTGGAGACTCCCTTGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTGTATGTAAAGAGTGAAGACTATGCGAGCTGCAACACCGATTCACCTTATTCAAAATTCTCTGATGGCCATACAGTCTTCAAGCTAGACAAATCAGGGCCTCACTTTTTCATAAGTGGAAGCAAAGACAACTGCCTGAAAAATGAAAAGTTAACAGTGATTGTGCTTGCTGAAAGGAACAAAAACAGCAACCAAAGCACCAATGCTTCTCCACCTTCACCACAATCATCATCTTCATCACCACCACCTACTACTGGGCAAGAGGGTCAATCTCCAACTTCAGACACAAACCAAACACCAAGCCCTGTTAGTGAACCTCCACCTCCCAATGCTGCTGCTTCAGCCTTTCTCTCTCTTGCTGGCTCTGTTGGAGCATTCATGGTTTCAGTCATCATGCTTTTATCTTTCTAA 645 0.4419 MATFIFRSNKAVHAFVGCLCLLLMVQKGASYDFVVGGQKGWSVPNDPTFNPFNQWAEKSRFQVGDSLVFNYQSGQDSVLYVKSEDYASCNTDSPYSKFSDGHTVFKLDKSGPHFFISGSKDNCLKNEKLTVIVLAERNKNSNQSTNASPPSPQSSSSSPPPTTGQEGQSPTSDTNQTPSPVSEPPPPNAAASAFLSLAGSVGAFMVSVIMLLSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00609 214 MobiDBLite consensus disorder prediction 137 191 - -
Vian5g00609 214 SUPERFAMILY Cupredoxins 30 134 IPR008972 -
Vian5g00609 214 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Vian5g00609 214 PANTHER BLUE COPPER PROTEIN 31 153 IPR039391 GO:0009055
Vian5g00609 214 CDD OsENODL1_like 31 134 IPR041846 -
Vian5g00609 214 ProSiteProfiles Phytocyanin domain profile. 31 135 IPR003245 GO:0009055
Vian5g00609 214 MobiDBLite consensus disorder prediction 137 178 - -
Vian5g00609 214 FunFam Early nodulin-like protein 9 31 145 - -
Vian5g00609 214 Gene3D - 31 147 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00609 Vian-Chr5 21967255 21968148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00609 17 194 Phytocyanin Superfamily AT3G20570 48.889 1.55e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00609 - - gmx:100781182 303.138