Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00606 ATGAAACGGGTTCAAAGAATAACCTTCACGCTGCAAGTTGCCAGAGAGTTGAGGAAAAGACAGGTCGAACTGTTGGCGCCGTTGATAAGGAATAGAAAGGCCTACGTGGAAGGGAGATTCTCTGGAGATGAAATGGCGAGTCCCGTTGGGGCTGCTTACTTGGACTCGTTGTTCGGGTTGGAGGTGCCTGGACGTGGACAGATGGGGGAGGAAGAGCTCGTGACGCTCGTGTCGGAGGTTATCAGCGCCGGGACGGACACGAGCGCCACCGCGGTGGAGTGGGCGCTGTTTCATTTGGTGGTGGATCAAGAGATTCAGGAGAGGTTGTACAAAGAGATTGTGGACTGTGTGGGGAAGGACGAGGTGATTACGGAGAGTCACGTTGAGAGGATGCCTTACCTGAGCGCCGTGGTGAAGGAGACCTTCCGGCGTCACCCGTCGAGCCACTTCGTGCTGTCCCACGCTGCGACGGAGGATACTAAGCTGGGAGGGTATACGGTCCCGAAGAACGCGAGTGTGGAGTTTTACACGGCCTGGTTGACTGAGGATTCGAATATGTGGGAGGATCCGAATGAGTTCCGACCCGAAAGGTTTTTGAGCGGGGATGGGGTTGACGTGGACGTGACCGGAACGAAAGGTGTGAGGATGATGCCCTTCGGTATAGGGAGGAGGATTTGTCCAGCGTGGAGTTTAGGCATGGTGCATATAAACTTGTTATTGGCTAAGATGGTGCAGGCTTTCCACTAG 747 0.5475 MKRVQRITFTLQVARELRKRQVELLAPLIRNRKAYVEGRFSGDEMASPVGAAYLDSLFGLEVPGRGQMGEEELVTLVSEVISAGTDTSATAVEWALFHLVVDQEIQERLYKEIVDCVGKDEVITESHVERMPYLSAVVKETFRRHPSSHFVLSHAATEDTKLGGYTVPKNASVEFYTAWLTEDSNMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWSLGMVHINLLLAKMVQAFH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00606 248 PRINTS P450 superfamily signature 83 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS P450 superfamily signature 217 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 92 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 226 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 216 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 72 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PRINTS E-class P450 group I signature 176 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 219 228 IPR017972 GO:0005506|GO:0016705
Vian5g00606 248 Pfam Cytochrome P450 14 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 247 - -
Vian5g00606 248 SUPERFAMILY Cytochrome P450 9 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00606 248 Gene3D Cytochrome P450 2 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00606 Vian-Chr5 21892644 21893390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00606 14 247 Cytochrome P450 AT1G11600 63.713 1.68e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00606 K21995 - gmx:100787281 409.453