Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00605 ATGTTTATTGCAATGTCAGGTCTGAGCAATCTGTTTGGTGGAACCTTTGGTCATAGAGAGTCAAATTTTATGTCTGAATTAGACGCTCAAATTCCCACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAGCAGCGAAATGGTAGAAAAAGCCTGACAACTGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAGTTCTGTTGCAATGGCACCGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCGACCTTTCTAGTCCAGATGGTTATTTTTGATGAGTGGATTTGTGAATGA 399 0.416 MFIAMSGLSNLFGGTFGHRESNFMSELDAQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQMVIFDEWICE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00605 132 NCBIfam translation initiation factor SUI1 29 125 IPR005874 GO:0003743
Vian5g00605 132 Gene3D - 14 130 - -
Vian5g00605 132 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 29 123 - -
Vian5g00605 132 ProSiteProfiles Translation initiation factor SUI1 family profile. 54 124 IPR001950 GO:0003743|GO:0006413
Vian5g00605 132 FunFam Eukaryotic translation initiation factor SUI1 25 130 - -
Vian5g00605 132 Pfam Translation initiation factor SUI1 51 123 IPR001950 GO:0003743|GO:0006413
Vian5g00605 132 CDD eIF1_SUI1 52 128 IPR005874 GO:0003743
Vian5g00605 132 SUPERFAMILY eIF1-like 23 130 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00605 Vian-Chr5 21883318 21886963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00605 24 122 Eukaryotic Initiation Factors Gene Family AT4G27130 90.909 2.46e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00605 K03113 - pcin:129312453 218.009