Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00604 ATGACCATTCCTCAGCGCTTTGCAGACATAGAAAGCAATAACACTTTCACTTCAGCCTTATCCAATTTAGGGTTTCGGTTCCTGACCGTACTTTTGACGTATCGAAACCTTAAATTTAGGATCAGTGTGCTATTATTGTTATTCAATTTTACTAACATGTTGATTGCAATGTCAGGTCTGAACAATCTGGTTGGTGGAACCTTTGGTCATAGAGAGTCAAGTTTTATGTCTGAATTAGACGATCAAATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAACAGCGAAATGGTAGGAAAAGCCTGACAACTGTTCAGGGATTGAAAAAGGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAGTTCTGTTGCAATGGCACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTGCCTTCCTAGTCCAGGTAACTGTCGTCCTCATCTTTGTGTTATGA 552 0.4112 MTIPQRFADIESNNTFTSALSNLGFRFLTVLLTYRNLKFRISVLLLLFNFTNMLIAMSGLNNLVGGTFGHRESSFMSELDDQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQVTVVLIFVL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00604 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 81 177 - -
Vian5g00604 183 Gene3D - 65 180 - -
Vian5g00604 183 Pfam Translation initiation factor SUI1 103 174 IPR001950 GO:0003743|GO:0006413
Vian5g00604 183 SUPERFAMILY eIF1-like 75 176 IPR036877 GO:0003743|GO:0006413
Vian5g00604 183 ProSiteProfiles Translation initiation factor SUI1 family profile. 106 176 IPR001950 GO:0003743|GO:0006413
Vian5g00604 183 NCBIfam translation initiation factor SUI1 82 177 IPR005874 GO:0003743
Vian5g00604 183 FunFam Eukaryotic translation initiation factor SUI1 77 180 - -
Vian5g00604 183 CDD eIF1_SUI1 104 178 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00604 Vian-Chr5 21876636 21878930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00604 76 178 Eukaryotic Initiation Factors Gene Family AT4G27130 87.379 9.90e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00604 K03113 - pcin:129312453 221.09