Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00585 ATGGACTTGAATGAGTTTTCAAGTGTCGGTGTGACTAGTTCGGCAGGAACTCCTTGCACATCATCTCATATTCCTATTTCAGCAATACCCAACAGGTTGCTTGGATCCTTGAAACACGACATAGAACACTCTCCTAATTCGGCCCTTTCTACCCATTTTGATTCTGATACCCTTTCTTCTGCGCTAAGTGACGGCCAGGAACAGCACACCGCTGGGGAAATTCACTCTGGTGTAAACCCTTTGCAGGAAACCAATCATTATTTGTATAGGCCAGTCTCATCTGTGGACCATCTCCAAGACGGTAAGCATCTATCTACTAGATGCTTTTTTCCACAGGATATAGGTTATGATCATGAAACCAGGTATGCATTGCTGGAATTAGAAACTGCTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGCACTTCTTTGGGTGTTAACAGAAGGCCTACAACATCTGCCCAGAGAAATAGATCCTGGAGCCATGAGGGGCAGCCAAGTGATGTTGCACGAGTAGGTAAGCGTCACAAATCAACTGAGGAAGTATCACTACAAGGATTCCCATCAACCAATTTGAAAGAATTGCTGATTGTATCAGCCAAAGCCTTGTCTGAAAACAACATGAAAGATTTTGATCGACTGATAGAGAAGGCTAGAAGTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTGGAAGGACTTGTTGCAAGGAAGGGGGCATCAGGGAATAACATCTACCGTGCACTTAGATGCAGAGAACCTGAAGGAAAAGACTTGCTCTCTTACATTCAGCTACTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCCATTGCTGAAGCTTGTAGAGATGAGGACCACATTCATATCATAGACTTTCAGATTGGTCAGGGAATTCAATGGATGACACTTCTTCAAGCTCTTGCTGCAAGACCTGGTGGAGCTCCTCATGTACGGATCACAGGGATTGATGACCCCCTTTCTAAATATGTTCGTGGTGATGGATTAGAAGCCGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTAGAGTTCCACAGTGTGCCTGTTTTAGCTCCATATGTGACAAAAGACATGCTTGACATTAGGCCTGGTGAAGCTTTGGCTGTGAATTTCCCTTTGCAACTCCATCACACGGCTGATGAGAGTGTGGATATGAATAATCCAAGGGATGGACTTTTGAGATTGGTAAAATCACTTTCTCCCAAGGTAACTACGTTGATTGAGCAAGAGTCGAACACTAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATTTTTGAGTCCATTGATGTGTCTCTTGCAAGAAAGAGCAAGGATCGGATTAATGTGGAACAACATTGTCTGGCACGGGATATTGTCAATATTGTTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAACTATTAGGTAAGTGGAAGTCTAGGTTCACAATGGCTGGATTTTCTCAATATCCTTTGAGTTCATACGTTAATTCTGTCATAAGGAGCCTGCTTAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTGGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCATGGCATTGA 1698 0.4323 MDLNEFSSVGVTSSAGTPCTSSHIPISAIPNRLLGSLKHDIEHSPNSALSTHFDSDTLSSALSDGQEQHTAGEIHSGVNPLQETNHYLYRPVSSVDHLQDGKHLSTRCFFPQDIGYDHETRYALLELETALMAPDGDDQVTTSSTSLGVNRRPTTSAQRNRSWSHEGQPSDVARVGKRHKSTEEVSLQGFPSTNLKELLIVSAKALSENNMKDFDRLIEKARSVVSITGEPIQRLGAYLVEGLVARKGASGNNIYRALRCREPEGKDLLSYIQLLYEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIGQGIQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVPVLAPYVTKDMLDIRPGEALAVNFPLQLHHTADESVDMNNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLARKSKDRINVEQHCLARDIVNIVACEGKERVERHELLGKWKSRFTMAGFSQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00585 565 MobiDBLite consensus disorder prediction 1 21 - -
Vian5g00585 565 MobiDBLite consensus disorder prediction 135 184 - -
Vian5g00585 565 MobiDBLite consensus disorder prediction 136 167 - -
Vian5g00585 565 Pfam GRAS domain family 195 564 IPR005202 -
Vian5g00585 565 MobiDBLite consensus disorder prediction 45 79 - -
Vian5g00585 565 ProSiteProfiles GRAS family profile. 186 565 IPR005202 -
Vian5g00585 565 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 158 561 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00585 Vian-Chr5 21031246 21032943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00585 118 564 GRAS Transcription Factor Family AT5G48150 56.027 1.70e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian5g00585 GRAS 1.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00585 - - gmx:100775665 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00585 5 21031246 21032943 Vian5g00585 5 21031246 21032943 ECH