Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00557 ATGATGTCTGAAGAGTCACTGAGTATTGTGGTGATCCACTATGCATCAAGAGACTTCAACACAAGGGCCATAAAAGTGGTCATGCAGGGATTTTCACTTGGTCGTGGAGACAAGCTTACACTTCTTGTAATTCTTCGCCAAGCTTATAGTCCCACTAGGCTTCCCTTCATTGCACCTGCAAAATTGCGTGGATTATTTGAGACTGATCACAAAATTGTTGAGGAAGAAAATCCATTTATGAACGAAACTACTCAGATCCAATTCCGGATAGAAGTTCTGCAGGGTAAATTACCAGAGGTTGCTGTAAATGCTGCCATCCGTCTGGAGGCAACATCAGTGATAATTGATAGAATACGGCAAGTGACAAATTCCTGCTCCAATACCAGCTCTTCCTTTCCTACTCTTGCAAAGGGTGGTTGCCCCCAACCCCAACTTTATTCTCAAATAAAACAAATCCCTGAAAATAGAGTACAAGACATGGAAAGAGGGTATTGCCTACTATCCATTACTGATACTCAAAAGACTAATCATACTGAAGAGTATAACATAGAAACACCAGCAGAACATAGCAACAACCCTGAAGCATATCAAATAGTTGAACAATTCAAAAATTCTGTTTGCTCAGTGTGCAAGAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATACGCAGAGCTGCATGAAGCTACACAAGGTTTTTCACCAAAAAACTATTTGTCCGAAGGAGGATTTGGTTCTGTCTACAAAGGAAGGCTGCAAGGAGGATTAAGGATTGCTGTTAAGCAACATAAGCCACTACTCAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGTTGGATAATCACGATTGCCATCAGCTTTTCTGGATGATTCGTCTGGCAGAAAAATGCCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACAGTGGTGAATGCCTTAACTCATATACTGGAAGGCAACACATGCAGTGTTGTTCTAAGAGACTGCTCTCCAGCACAGTCAGATTCATCATATGACATGTCAGACTTGCTTATCTCAGATACCTCACAGGAGATAGAAGGTGAAGATACAAGCAACTATGCAGGATATGCTTCTATGTGCTTTAGACCACCACCATCTCCTCCACTAGGAAGCACTTCCTCAAGTACATCAAGTGTGTTCACAGGGCTGAGTGAATCTCCTATAGATGATTTGTCCAATAATAAGAATAAGGGTATAAGGGCAAATGAACAAGAATTGCAACGGGTCAGTGGAAGAGGTGGTGGACTTCTCTCTGTACAGGCCATGGCACTTGCCCATGGTGAAGGTGTCATTGAGGTAGCCTATAATTTGTTGGATCCAAATAAAGTTGGTGGTGAAAGAGTACAAGAAGAAGTTGAGAGCCTAGCAAGAGAAGAAGCCCCGCCCTCCATCGTCCTTCGGCGACCTCCGCTGTCCTCCGCCACCTCTCCGGAAAGTTAA 1479 0.4266 MMSEESLSIVVIHYASRDFNTRAIKVVMQGFSLGRGDKLTLLVILRQAYSPTRLPFIAPAKLRGLFETDHKIVEEENPFMNETTQIQFRIEVLQGKLPEVAVNAAIRLEATSVIIDRIRQVTNSCSNTSSSFPTLAKGGCPQPQLYSQIKQIPENRVQDMERGYCLLSITDTQKTNHTEEYNIETPAEHSNNPEAYQIVEQFKNSVCSVCKNRRPKFEVMKEFTYAELHEATQGFSPKNYLSEGGFGSVYKGRLQGGLRIAVKQHKPLLKERNYPDLIDERMLDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVNALTHILEGNTCSVVLRDCSPAQSDSSYDMSDLLISDTSQEIEGEDTSNYAGYASMCFRPPPSPPLGSTSSSTSSVFTGLSESPIDDLSNNKNKGIRANEQELQRVSGRGGGLLSVQAMALAHGEGVIEVAYNLLDPNKVGGERVQEEVESLAREEAPPSIVLRRPPLSSATSPES 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00557 492 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 194 267 IPR047117 -
Vian5g00557 492 MobiDBLite consensus disorder prediction 377 409 - -
Vian5g00557 492 MobiDBLite consensus disorder prediction 467 492 - -
Vian5g00557 492 SUPERFAMILY Protein kinase-like (PK-like) 219 280 IPR011009 -
Vian5g00557 492 MobiDBLite consensus disorder prediction 384 409 - -
Vian5g00557 492 Gene3D Phosphorylase Kinase; domain 1 207 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00557 Vian-Chr5 19774327 19785701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00557 222 331 Trihelix Transcription Factor Family AT1G23540 39.286 2.53e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00557 - - vum:124838318 311.997