Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00555 ATGTTAGTGTTTTCTGTTGCTTATGCGATTACTTCAAAGAGGGTTTCTAGAGATGTTATCGACTTGTTGGTTCGAGCACACCGCGAATCGATTCTGGGAAATCGTGTGCCCGCTTATGATGGACGAAAAAGTCTTTTTACCGCCGGACCGCTGCCTTTTGAAATTAAAGAATTTAAGGTCAAACTGGGAGATAACGATGAACCAGGGTCTTCTGCCACCCGTACTTCTTCCAGGAAAAAGCGTGAACGTGAGTTTAGGGTCACAATCCGATTTGCTTCGAAGACTGCCCTTCATCACCTTACGCAGTTTCTCAGTCGCCGTCAGTTGGACTGCCAACAGGAAACTATTTAG 351 0.4558 MLVFSVAYAITSKRVSRDVIDLLVRAHRESILGNRVPAYDGRKSLFTAGPLPFEIKEFKVKLGDNDEPGSSATRTSSRKKREREFRVTIRFASKTALHHLTQFLSRRQLDCQQETI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00555 116 MobiDBLite consensus disorder prediction 63 82 - -
Vian5g00555 116 Pfam N-terminal domain of argonaute 12 116 IPR032474 -
Vian5g00555 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 17 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00555 Vian-Chr5 19742071 19742640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00555 10 116 Eukaryotic Initiation Factors Gene Family AT5G43810 47.664 1.78e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00555 K11593 - gmx:100805246 154.451