Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00530 ATGAAAAAGATCAATCTTTTACTCAGAAAATGCAAGAGTTTGTCAAGGCAGCTAGGGAGATCTTCATCATACAGTAGCCTGAGGTCCAAATCCACAAAAGAAGACATATGGGGTGGCCATGGCATGCAAGAAGATGAACATTGTGAAACAGTGTTTGTTGGTAGCACAAGAAAACGGTATGTGATCAGCAAAAAGTATCTGAATCATCCTCTTCTGAATGAACTTATCAACAAGTCAAAGCCAAAGGGTAGTGATGAGAGTAGTGTTTTGGTGGTGAACTGTGAGGTGGTTCTCTTTGATCATCTTTTGTGGATGCTAGAAAATGCAGATCCTAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCCGAACTCTACGTGTTTTGA 384 0.4036 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGHGMQEDEHCETVFVGSTRKRYVISKKYLNHPLLNELINKSKPKGSDESSVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00530 127 PANTHER EXPRESSED PROTEIN 7 126 - -
Vian5g00530 127 Pfam Auxin responsive protein 31 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00530 Vian-Chr5 16518514 16518897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00530 50 108 Calmodulin-binding Proteins AT5G20810 38.333 1.64e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00530 - - gmx:100500162 211.46