Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00516 ATGGGCGCTGATCCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGCTGTTGAATGCTAAAAAGACCATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTCACTGCACTAACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGATAGAGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGCACAAGATCGACTTCATTCAGTCCCCAGCTCTACCTGTTCTTGATAAACTATTAGAAGACGATTCGAATAAGGATAGTTTTGACTTTGCCTTCGTTGATGCTGATAAAGATAACTACTGGAATTACCACGAGCGGCTTCTTAAACTGGTGAAGATTGGTGGGTTAATAATCTATGATAATACCCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCAATACCCAAAAGAAAATACCGGCAGGCTGTTGTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTGTTGTTTCAATTGGTGATGGCTTCACTATTTGCTGGCGTGCTCAATGA 561 0.4278 MGADPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIQSPALPVLDKLLEDDSNKDSFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPIPKRKYRQAVVAFNKAIADDSRVEISVVSIGDGFTICWRAQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00516 186 CDD AdoMet_MTases 28 128 - -
Vian5g00516 186 PANTHER O-METHYLTRANSFERASE-RELATED 1 184 - -
Vian5g00516 186 Pfam O-methyltransferase 3 184 IPR002935 GO:0008171
Vian5g00516 186 Gene3D Vaccinia Virus protein VP39 1 185 IPR029063 -
Vian5g00516 186 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 184 IPR029063 -
Vian5g00516 186 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 185 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00516 Vian-Chr5 15894876 15895692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00516 1 184 Monolignol Biosynthesis Gene Families AT4G26220 64.130 7.29e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00516 K00588 - gmx:100792717 338.576