Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00513 ATGATGGAACAGTCTAGATTCTACAAACATCTTCAATGCAATAACATGGAGCCTAGAAATGAGGAGTTCCAGTCGGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCAGAGTATTAGACGGCCATCTGACTATAGCACATCAGATGTTAAACCGGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTCATGCGAGATAGGGTGAATCTCAGGAAGCCCATGTTTTCAAATGTTAATGATTCCAATTCCAATTATGCAACTGGCTGCATGGAACTGAAAGGTGTCTTAGGCATCAACCACACAGCTTCTGAAAGTGGATCAGACATTTCTATTCTATCAAAAACTGAGAAAGGTCTGACAGAGTTTAACAGACCGAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGGTCAATGCCAAGAGTTTCACTGAATCAGGAGAATAGTCGATTTGTACGTGGGTATGGGTCTTCTGTTGGTTCTGACAGCTCATCAATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGGAAGTTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAAAAAGCTTTGTTAATTTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTCGATGCATTGGTATCAGTGTCGTCTGATGAGGATTTGCAGAATATGATGGAAGAATGTAATCTTCTAGAAGATAGAGAGCGCTCAAAAAAGCTTAGGCTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCATTTTTCTCTCAGCAGCATTAGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGATCAATAAACAGCTCAACCCCACTTGGTGTCAGTTTCTCAGCTGATGATCTGCATGAATTAGAAAGGCAAACTTCACAGAGAGAGACTAATAATAGAGCTGCTGTAGAATCTGTAGGTGCCAGCGCTCCCTTGACTAACAAATCTGATCCTTCATTGACTATTCATTCTTCACAAGCAGTTTTACCAAATGCCTCAAATTCTTATGAACTTGATCAACTTTCTTATGGTGACCAAATGCCTCAATTTGGGGATTATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCACTCATAGCCCTGTTGGAGAGACTTTTATTCCTATGGCTCCTCATCTGCTTAACAATCAACAAGGGGTTCAGAATGAAGACCATGTATCTAGTGGATTACAAATTCAAAATTCTCAGTTATCTGCAATGCAGGTGAAAAAGATAAGTGATAATTCAGTTAAGCAAGGGAGTGACTCTGAAAATGTTTTAACCTCAGAAACCACGTCTCCAGCTCCCTTACAAACCTCTGACAGTGGCTTAAAAAGTAATTTTCATGAAGCATCGGTTGTAGTTACCATGCCTGAGGGACATCCACCTTCATTACCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAAGAGTTGTCTTCTACTTCTAGCAGTGCATTTGTTCCTGCTTATGTTGATTCCCATCCAAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTGAAAGAGTTTATTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGTTGCTGAATCGTTCCTCAAAGTCAGATGACACACACAGTTCTCAACTACATGTGTCAGATTTACTTTCTGATGTCAACCCAGAGGACCCAGTAACAGAATCTGGGGGCAACTTGCATCCAACTGACGAATTGGGTAATGCAGAAAAGCCCTTGCATGCAGATGGCCATACCACTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCATTGCCTGATACAAACAGTCTTATTAAGTCAAAACTATCTGAGCTCACAGACCCTGAGTTGAAGCCAGTGTTATCAAGTAATGAAGGAACTAAAGATGTTGAAACTGAAAATTATCGTAAAGATAGCCAAATTAAGCCCTTGCTTGACGAAACTGAAACCAAGACCAAAACCAAAGATGGTAAATCAGATGTTCCTACATTGCATCATGTTTCCTCTGCTAAGCGTCTTGATGATCTAGCATCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCAAATGATGGTTGTGTGGTGGAAGAACTACCTGTATCTGTAACTGGGAGTGTAACTAAAGATGTTAATCAAGATTTCCCCCAAAATGTTGTTTCCAAACAATCTCAAGGGGACATTCTTATTGACATTGATGATCGATTTCCCCGCGAATTGCTTTCAGATATGTTTTCTAAAGCAATACATGGAGAAGATCCCTCCAGTCTGCATCCATTGTCTGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCCAAAAGATGGTCATATTTTCATAAATTAGCACAAGGGCTTGATAACGTCTCTCTTATTGATCAAGATCATCTTGGTTTTCCACCTGGCATAGGAAAAACAGAAGATAATAGAACTCATCACGTTATGCCGCTAACAACTGATGGAGATCCCCTACATCATGAAGATTCCCATCTCAAATTTAATGAAGAAAATCCTGAGGACTTACATGTAAGGATTGAAACTGAAACTACCATTCTGAAGTCTAATTATAATCAATCCCAGCTTAAGGACAATGAGAGCATGCAGTTTGATGCTATGATGGAAAATCTAAGAATGCAAGGGTCAGAGTTTGAGGATGGCAAATTTGATGTGAAAAATAGCAACCTACCTCCAGCCCTTGATCCTTCTTTTGGAGATATTGACATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAGGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTCTCCAAACTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGCGAAATACTTTGGTTACTGGTGGTGTGCGTGGGACACTACCTTGGATGGCACCAGAGCTTCTGAATGGAAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAAATTCTTACCGGTGAGGAGCCATATGCCAATATGCATTATGGTGCAATTATAGGAGGAATTGTAAATAACACATTAAGGCCAACCATCCCAAGTAACTGTGATCCTGAATGGAGAACACTGATGGAACAATGCTGGGCTCCCAATCCTGCAGTCAGACCATCCTTCACAGAAATTGCCAGTCGTTTGCGCATAATGTCTGCGGCAGCAAGCCAAACCAAAACACAGGGCCATAAAACATCTAAATGA 3744 0.4052 MMEQSRFYKHLQCNNMEPRNEEFQSGSQSVIQDHMDGMQSIRRPSDYSTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPMFSNVNDSNSNYATGCMELKGVLGINHTASESGSDISILSKTEKGLTEFNRPSTSLHGDRSNYGSIRSMPRVSLNQENSRFVRGYGSSVGSDSSSMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSKKLRLFLFSMSDLEDAHFSLSSISDDSEVQYVVAVNGMDFGSINSSTPLGVSFSADDLHELERQTSQRETNNRAAVESVGASAPLTNKSDPSLTIHSSQAVLPNASNSYELDQLSYGDQMPQFGDYSRQYFVHHGLNSTHSPVGETFIPMAPHLLNNQQGVQNEDHVSSGLQIQNSQLSAMQVKKISDNSVKQGSDSENVLTSETTSPAPLQTSDSGLKSNFHEASVVVTMPEGHPPSLPSTKKVQHKDYEELSSTSSSAFVPAYVDSHPNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQLHVSDLLSDVNPEDPVTESGGNLHPTDELGNAEKPLHADGHTTDNGFSKNQMSKPLPDTNSLIKSKLSELTDPELKPVLSSNEGTKDVETENYRKDSQIKPLLDETETKTKTKDGKSDVPTLHHVSSAKRLDDLASNLPEIDWGEASGKESNDGCVVEELPVSVTGSVTKDVNQDFPQNVVSKQSQGDILIDIDDRFPRELLSDMFSKAIHGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQGLDNVSLIDQDHLGFPPGIGKTEDNRTHHVMPLTTDGDPLHHEDSHLKFNEENPEDLHVRIETETTILKSNYNQSQLKDNESMQFDAMMENLRMQGSEFEDGKFDVKNSNLPPALDPSFGDIDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAASQTKTQGHKTSK 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00513 1247 MobiDBLite consensus disorder prediction 625 642 - -
Vian5g00513 1247 MobiDBLite consensus disorder prediction 669 702 - -
Vian5g00513 1247 PRINTS Tyrosine kinase catalytic domain signature 1199 1221 IPR001245 GO:0004672|GO:0006468
Vian5g00513 1247 PRINTS Tyrosine kinase catalytic domain signature 1084 1102 IPR001245 GO:0004672|GO:0006468
Vian5g00513 1247 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672|GO:0006468
Vian5g00513 1247 PRINTS Tyrosine kinase catalytic domain signature 1047 1060 IPR001245 GO:0004672|GO:0006468
Vian5g00513 1247 Gene3D Phosphorylase Kinase; domain 1 958 1052 - -
Vian5g00513 1247 PANTHER SERINE-THREONINE PROTEIN KINASE 221 1229 - -
Vian5g00513 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Vian5g00513 1247 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Vian5g00513 1247 ProSiteProfiles Protein kinase domain profile. 965 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00513 1247 MobiDBLite consensus disorder prediction 336 360 - -
Vian5g00513 1247 Gene3D Transferase(Phosphotransferase) domain 1 1053 1247 - -
Vian5g00513 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1053 1245 - -
Vian5g00513 1247 CDD STKc_MAP3K-like 971 1228 - -
Vian5g00513 1247 MobiDBLite consensus disorder prediction 452 486 - -
Vian5g00513 1247 MobiDBLite consensus disorder prediction 567 581 - -
Vian5g00513 1247 CDD PB1_UP2 180 276 - -
Vian5g00513 1247 SMART serkin_6 965 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00513 1247 Gene3D - 195 278 - -
Vian5g00513 1247 MobiDBLite consensus disorder prediction 567 642 - -
Vian5g00513 1247 ProSitePatterns Protein kinases ATP-binding region signature. 971 996 IPR017441 GO:0005524
Vian5g00513 1247 SMART PB1_new 191 278 IPR000270 GO:0005515
Vian5g00513 1247 MobiDBLite consensus disorder prediction 331 360 - -
Vian5g00513 1247 SUPERFAMILY CAD & PB1 domains 192 280 - -
Vian5g00513 1247 SUPERFAMILY Protein kinase-like (PK-like) 955 1228 IPR011009 -
Vian5g00513 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 958 1052 - -
Vian5g00513 1247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Vian5g00513 1247 MobiDBLite consensus disorder prediction 655 702 - -
Vian5g00513 1247 Pfam Protein tyrosine and serine/threonine kinase 966 1228 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00513 Vian-Chr5 15378216 15391568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00513 50 606 MAP Kinase Kinase Kinase AT1G16270 36.926 9.47e-86 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vian5g00513 PK_Tyr_Ser-Thr 3.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00513 - - gmx:100817937 2099.71