Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00484 ATGAAGCTTAAGCTGAAGAAACTCAGAAGCAGAGACGAACAAACTCTGAAGGTGACCTCCGCCCCTCCATGCGCGCCACAGATCCGCCCCTCCATGCGCGCAGATCTACTCTCCGTCCACCGCCACAGATCGCCGCGTCCTCACCGCCGCTGCGTCCTCGTCGTCGTTGCGTTCGCGGTACTTTTGAATGGCGGCGACGACTTCCTTGGTCTTGCCAACTCCGATGCAATCTTGGCCATTTTTGTTGCCGACAATGAAGACAACTCTGAAGCGCAACTGCTTCCCTCCCTTAACAACTTTCGTCACCCTTCTCACCTGGACCACCCTATCTTCGAACCCGTCGCGGACCTTCTCCTTCTTCGATTACATCTCGACCAGCTCCAACTCTCACCCAAGCTCAACGCGCTTAAAACTAATGTCGCGTTTTCCGACGCTACCGTGCCCAACATTCTGGAAGGGTTCCCCGATGTGGTTGTCACGGGCGAGAACGAAATCACGAGCAGGCTGCTGCCGTTGTTTCGGGAAATCAAGGAGCTAGGGTTTTCCAATCGTGAGATGAGGAGAGAGATCTCGCTGGAACTGAGGATTCTGAGGATGGAAATTGGAGAGCTTACATGGTGTTTGAGACTGATAGAGAGTTTGAAATGCAGAGAAAGTATCAGAGAGGGTTATAGGGTGATTTGTTACGGGGTTGGGGATGTTGCAAGAAAGGTTGAGTTTCTGGTGGAGAGGATGAAATGTAGTGTGGAGTGTTTGGCTAAGGTGCCTAAATACTTGGGTGTGAGTTTCGAGAAGCAGATTGTGGCCAAGTATAGTGTGGTGGAGTGTTTGAGGAGGAAGGGTGCCATTGGGTTTGAGTTTGGGTTGAAGGATTTGGTTATGCCTTCTAGGCTTAGAAAGAAGAGGGGTCACGACCCACACTTGGAACCACGCGTCCAGGAGCTTCCTCTCGGTGCAGCACACATCCATGTTCACGGTCCACAGCAGCAGCGTCACATGGGTGCAAAAAGAGAATGCATCCAACACGACCCACATCTTCATTTTTCCAGCAAGGGGCAGCCACGTTAG 1068 0.5206 MKLKLKKLRSRDEQTLKVTSAPPCAPQIRPSMRADLLSVHRHRSPRPHRRCVLVVVAFAVLLNGGDDFLGLANSDAILAIFVADNEDNSEAQLLPSLNNFRHPSHLDHPIFEPVADLLLLRLHLDQLQLSPKLNALKTNVAFSDATVPNILEGFPDVVVTGENEITSRLLPLFREIKELGFSNREMRREISLELRILRMEIGELTWCLRLIESLKCRESIREGYRVICYGVGDVARKVEFLVERMKCSVECLAKVPKYLGVSFEKQIVAKYSVVECLRRKGAIGFEFGLKDLVMPSRLRKKRGHDPHLEPRVQELPLGAAHIHVHGPQQQRHMGAKRECIQHDPHLHFSSKGQPR 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00484 355 Pfam mTERF 226 282 IPR003690 GO:0003690|GO:0006355
Vian5g00484 355 Gene3D Transcription termination factor 3, mitochondrial 115 297 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00484 Vian-Chr5 13803452 13821204 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian5g00484 mTERF 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00484 - - vum:124840038 253.447