Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00442 ATGACACTTTTTGGTAAAATCAGCACTGAAATTGGAGTTCATGCAACTTCTGAAAAGTGGTTCAACCTCCAGGCAACGCAACTCCATCAAGTTCAAAACCTTGCTGAGAGAGTTCATGGAACCAGTCTGCACCATGGTGAAGATTGGCATCACAATGAGTCCATCAAGAAATGGACTTATGTTATAGATGGTAAGGTTACAACATGTTATGAGAGTATTGAATCCGTTGATGAAGCAAACAAAACAATCAACTACAAACTCTTTGGTGAAGAGATCGAGCACAAGTTCAAGGTGTTTAGGCTCATATTTCAAGCAATTGATAAGGAGAATGATGTTGCTATCATCAAATGGACCATTGAATATGAGAGGGTTGGTGAAGACGTTGAACCTCCATACGGCTACATCGATAAAAACATATGCCATTGTTTTCCTTCGCGTGTTTCCCTACGTTTCTGCCTCCACAACTACGCCGCTTCCTCCTTTGCTGCCTCCAACCACTTCAAACGTTTCTGCGTTTCTGCTCCCTACGCCGCCTCCTCCCTCCGCCGCCTCCTCCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAAGAGCCGCGACAACGAGGATCACGTCACCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCAACTCTCGCCTTATTCCCTTGGCTTCCTCCGGCGATTCTAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGATCTATTCATGAGGTTGAAAGTAGGGGAAGGGGGACCGGTGGGGGTCTGACAGTGAAAACTAACCCAACGGCCGGAGGCAGAGTCGACGATGGAAGCGTCGGACTTGGGGATGTCAGCCTTGTGATTAGAGGGGTGACAGGGGCGCTGTTGGATATCCTTAGAGGAGGAAGGTTGGCGGGGATTGAAGTTATGTTGCGGATGAATGGGATGAGAAAGGAAGAGGGGTTTGCGTCAATGGGAGTGGGGTTGGGGAAGATGAATGGGGGAGAAGGAAGGAGCTGTCTTGTTTGTGGAAGAGGTTTTGAGGCGCGGAATCCCTTATGCTTCGGAGGATAA 1107 0.4905 MTLFGKISTEIGVHATSEKWFNLQATQLHQVQNLAERVHGTSLHHGEDWHHNESIKKWTYVIDGKVTTCYESIESVDEANKTINYKLFGEEIEHKFKVFRLIFQAIDKENDVAIIKWTIEYERVGEDVEPPYGYIDKNICHCFPSRVSLRFCLHNYAASSFAASNHFKRFCVSAPYAASSLRRLLPRGASSPRSSRRKSRDNEDHVTVIRDYRSKIESELSNICDGILKLLNSRLIPLASSGDSKVFYLKMKGDYHRSIHEVESRGRGTGGGLTVKTNPTAGGRVDDGSVGLGDVSLVIRGVTGALLDILRGGRLAGIEVMLRMNGMRKEEGFASMGVGLGKMNGGEGRSCLVCGRGFEARNPLCFGG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00442 368 PRINTS 14-3-3 protein zeta signature 212 236 IPR000308 -
Vian5g00442 368 PRINTS 14-3-3 protein zeta signature 243 265 IPR000308 -
Vian5g00442 368 SMART Bet_v_1_2 2 142 IPR000916 GO:0006952
Vian5g00442 368 SMART 1433_4 108 337 IPR023410 -
Vian5g00442 368 Pfam Pathogenesis-related protein Bet v 1 family 5 136 IPR000916 GO:0006952
Vian5g00442 368 SUPERFAMILY 14-3-3 protein 195 265 IPR036815 -
Vian5g00442 368 SUPERFAMILY Bet v1-like 1 137 - -
Vian5g00442 368 Gene3D - 177 268 IPR036815 -
Vian5g00442 368 Gene3D - 1 142 IPR023393 -
Vian5g00442 368 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 136 - -
Vian5g00442 368 Pfam 14-3-3 protein 196 264 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00442 Vian-Chr5 11720224 11725109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00442 196 264 14-3-3 family AT1G78300 73.913 4.91e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00442 - - gmx:547541 233.417