Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00408 ATGGCAGCTCATGAAGTACCTCTGAGTTCTAGTGGGGCACAACCTGTTGAAGCAGCAGCAGGGGAATCGGGTGCTGCTGGAGAAGCTTTTCTGTGGGAGCTATTCGGGACAGTCACATATTTTTCAACCCTAGTATGGACAATACTGTCCGCTACTGCCTTAACTTGGATTGGGTGGTTTCCATTTCTCCTTTTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAACCAAATGAAGGCCCTAATTATGATACTGGAGTTAGAATGGGGGCAATAGGCTTATTGCTTAATTCAGTTGTTCTTGGAATAACGTCTGTACTCATGGAGAGGTTATGCAGGAAGCGGGGGGCTGGGTTTGTGTGGGGAATCTCAAATATCTTGATGGCTGTCTGCTTTATTGCAATGCTTATTGTAACCTATCTGGCAAATAGAATTGGCTATATAGGCAAAGAACTACTACCAACTGCCATTGTGATTGCTGCATTGACAATCTTTACCGTTCTTGGGTTTCCACTTGCAATCACTTACAGCGTTCCATATACCTTAGTTTCCACACATATTCAGTCATTGGGGCTTGGCCAAGGTGAGCAGGGTTGA 603 0.4494 MAAHEVPLSSSGAQPVEAAAGESGAAGEAFLWELFGTVTYFSTLVWTILSATALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDTGVRMGAIGLLLNSVVLGITSVLMERLCRKRGAGFVWGISNILMAVCFIAMLIVTYLANRIGYIGKELLPTAIVIAALTIFTVLGFPLAITYSVPYTLVSTHIQSLGLGQGEQG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00408 200 SUPERFAMILY MFS general substrate transporter 25 195 IPR036259 -
Vian5g00408 200 PANTHER SUGAR TRANSPORTER 3 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00408 Vian-Chr5 10304603 10305631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00408 2 190 Sucrose Transporter Gene Family AT1G09960 66.138 3.38e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00408 K15378 - gmx:100787939 347.436