Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00391 ATGGGGACTCAAACGATGGGATCTCAAGGTGGTGATAAAGACAGTAATGGAAAACAGTCACAAGTCCAGCCCCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTGGATGAGGTTCAGAATCAATTGGGTGATCTAGGGAAGCCGCTTACTAGTATGAACCTTGATGAGCTTCTGAAAAATGTGTGGACTGTTGAGGCGGGCCAGACAGCTGGTATGGACAATGAAAGCGCGGCACAAGCTGGTCAAGCTGCTCTGCAGCGTCAGGCTAGTCTGTCACTGACTGGTGCACTGAGCAAGAAGACGGTGGACGAGGTTTGGAGAGATATTCAACAAAACAAAGCCATTGAGGAGAAGAGGTTCCGTGACGAAAAACAGCCTACTTTGGGAGAAATGACATTGGAGGACTTCTTGGTGAAAGCAGGAGTTGTTACAGAAACATCTTCTAACCCAAAGAATGCTGGTACTGTATCCACACCGGTACCAGTACCAGTGCCAGTACCAGTGCCAGTACCGATGGATTCAAACGTGGCAGTAGCACCACAGTTTCCTTCACAAGGACAGTGGATACAATATCCACCAGTGCAATATCAGCATCCACAGCAAAGTTTGATGCAGATTTATATGCCTGGTCAGGGTATGGCACAACCAATACACATGGGGCCTGGAGCTTCATTGGATGTTTCGTTTGCAGATGGCCAGGTTGCAATGCCGTCTCCTATGATGGCAACAATGTCGGATTCACATACTCCTGGAAGAAAAAGGACCACTCCTGAGGACATGATGGAGAAAACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGTGAATCTGCTGCTCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCCCGTCTAGAAGAGGAAAATGAAATGCTGAGGAAACGACAGGAGATAGAGAAGATGTTGCCAAGTACACCACCTCCTGAGCCTAAGTATCAACTTCGCCGAATAGGATCAGCTCCTTTCTGA 1017 0.47 MGTQTMGSQGGDKDSNGKQSQVQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEAGQTAGMDNESAAQAGQAALQRQASLSLTGALSKKTVDEVWRDIQQNKAIEEKRFRDEKQPTLGEMTLEDFLVKAGVVTETSSNPKNAGTVSTPVPVPVPVPVPVPMDSNVAVAPQFPSQGQWIQYPPVQYQHPQQSLMQIYMPGQGMAQPIHMGPGASLDVSFADGQVAMPSPMMATMSDSHTPGRKRTTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRQEIEKMLPSTPPPEPKYQLRRIGSAPF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00391 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 266 311 IPR004827 GO:0003700|GO:0006355
Vian5g00391 338 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 337 IPR043452 GO:0003700|GO:0045893
Vian5g00391 338 MobiDBLite consensus disorder prediction 252 316 - -
Vian5g00391 338 MobiDBLite consensus disorder prediction 1 29 - -
Vian5g00391 338 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 266 318 - -
Vian5g00391 338 Pfam bZIP transcription factor 268 312 IPR004827 GO:0003700|GO:0006355
Vian5g00391 338 CDD bZIP_plant_BZIP46 268 313 - -
Vian5g00391 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 271 286 IPR004827 GO:0003700|GO:0006355
Vian5g00391 338 MobiDBLite consensus disorder prediction 242 338 - -
Vian5g00391 338 Gene3D - 266 319 - -
Vian5g00391 338 SMART brlzneu 264 332 IPR004827 GO:0003700|GO:0006355
Vian5g00391 338 Coils Coil 284 311 - -
Vian5g00391 338 SUPERFAMILY Leucine zipper domain 268 313 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00391 Vian-Chr5 9585937 9589067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00391 18 338 bZIP Transcription Factor Family AT3G56850 54.658 3.84e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian5g00391 bZIP_1 1.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00391 K14432 - gmx:100101875 489.189