Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00380 ATGTTTTCCCCACCAATGTCCCTTCTCTTCCTCTTTTTCCTCTCCCTCTTTCTTCCCTTACTCTTAGCTCAAACTCCTTCACCATCTCCAACACATGCTACTCATGCTCCTTCTCCATCACCATCCAAACGTGCTCCTTCTCCATCTCCAACGCATGCTTCTTCTCCATCACCTTCTCCATCACCATCTCCAACTCATGCTCCTTCTCCATCATCATCAACACATGCTCCTTCTACTTCTCCTTCTCCACCACCCTCTCTAACAAGTGCTCCACCACCACCTCTTCCACCAACTTCACCCTCTTCAGCATGCAAGGCCACATTATATCCAAAACTGTGCCGTTCCCTTTTCTCATCCATTCGATCCTCACCTTCTGATCCTTACAACTTAGGAAAATTCTCCATCAAACAAAGCCTCAAGCAAGCCAAAAAACTGGCCAAAGTCTTCGCGGATTTCCTCAAAAAGCACCAATCTTCATCTCTCAGCAGCGCAGAGATTGCAGCCCTAGAAGACTGCAGTGAGCTGAGCCAGCTGAGTGTTGGCTACCTGGAGTCAGTTTCAGAAGAGCTGAAATCTGCAGACTCGTCCAACACAGAGTTAGTTGAAAAGATCGAAACATATCTCAGTGCTGTGGCCACTAACCATTACACTTGCTATGATGGGTTGGTGGTGATCAAGAGCAACATTGTCAACACTCTTGCTGTGCCTCTCAACAATGTCACACAACTCTATAGTGTCTCTCTTGGGTTGGTCACGCAAGCTCTGAAGAAGAATCTGAAGAAGCATAAGATTCGCAAACATGGTCTTCCCACCCAGAATAACAAGGTCAGACAGCCACTGAAAAAGCTCATTAAGGTAACTATTTTCTATCTGGATCCTTAA 882 0.4615 MFSPPMSLLFLFFLSLFLPLLLAQTPSPSPTHATHAPSPSPSKRAPSPSPTHASSPSPSPSPSPTHAPSPSSSTHAPSTSPSPPPSLTSAPPPPLPPTSPSSACKATLYPKLCRSLFSSIRSSPSDPYNLGKFSIKQSLKQAKKLAKVFADFLKKHQSSSLSSAEIAALEDCSELSQLSVGYLESVSEELKSADSSNTELVEKIETYLSAVATNHYTCYDGLVVIKSNIVNTLAVPLNNVTQLYSVSLGLVTQALKKNLKKHKIRKHGLPTQNNKVRQPLKKLIKVTIFYLDP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00380 293 Gene3D Invertase/pectin methylesterase inhibitor family protein 100 254 IPR035513 -
Vian5g00380 293 PRINTS Proline rich extensin signature 81 97 - -
Vian5g00380 293 PRINTS Proline rich extensin signature 59 80 - -
Vian5g00380 293 PRINTS Proline rich extensin signature 47 59 - -
Vian5g00380 293 PRINTS Proline rich extensin signature 25 41 - -
Vian5g00380 293 MobiDBLite consensus disorder prediction 41 67 - -
Vian5g00380 293 SMART PMEI_2 95 250 IPR006501 GO:0004857
Vian5g00380 293 CDD PMEI-like_3 104 252 - -
Vian5g00380 293 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 250 - -
Vian5g00380 293 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 102 253 IPR035513 -
Vian5g00380 293 NCBIfam pectinesterase inhibitor domain 102 253 IPR006501 GO:0004857
Vian5g00380 293 MobiDBLite consensus disorder prediction 77 100 - -
Vian5g00380 293 MobiDBLite consensus disorder prediction 27 102 - -
Vian5g00380 293 Coils Coil 183 203 - -
Vian5g00380 293 Pfam Plant invertase/pectin methylesterase inhibitor 101 249 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00380 103 285 Carbohydrate Esterase AT3G10720 50.000 3.81e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00380 K01051 - gmx:100776781 288.885