Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian5g00367 | ATGACCCCAGCCGTGGAGGAGGACCACCACGACCCTTCCCTTTTCCACGACTCCAACGACCGTTTGCTCTCTTCATGCTCCTGCTCCACGTCCGCCTCCGACGACGACGCTCCCACTCCCCAAAACGACACCAAACCTATTAAAAACGACACTCATGCCCTCCCCCAATTCCCCTTCCCCACCATGTGCAAGTACGATGCCTGGATCTCCGAACCCTCCTCCCTCTCCGAGCGCCGCTCCCGCCTCCTCCGACAGTTCGGTCTCCCCACCCCGCCTTCCCCCGCCGCTACCATCCCCCGATCATCCTCCTCTCACCAATGCACCGACACTTCCACCGCCGCCGCCACTATTCCCCGATCGAAATCCGACAACACCGCGGATCGCGGTACCAAGCATTGCAAATCATCCGTTGTTCCCATTCGCGACAATGACAACGGTTTTCTCGTGAATAATAATATTAATATTAATAGTAGTATTAGTGGTAGTCATTCTGTGAATAATAGGATTTGTGTGAGTGTATCTGAGGAGGGTGGAAATGGGGAGGGGAATGTGGTCGATGAAGTGGAGCAAGCGTGTACAATTAGGGATTTGGACAATGGGAAAGAGTTTGTGGTGAAGCGGGATGGGGTGTGGAATGAGGTTAAGGAGGTGGGGACTGGAAGGCGTTTGACTGTGGAGGAGTTTGAGATGACGGTGGGGCATTCTCCGATTGTTCAGGAGCTAATGAGGAGGCAGAGTGCGGAGGAAGGTCGCGATGGGGACGGCGTGGATGGAGAAGGTGATTGTGGGAATGCTGGTGGTGTTGATGATGAAGGGGATGGTGGCAAAGTGAGGAGAAAAGGTGGGTGGTTTAAGTTCATGAGTTTGAAGAGTGTTGTGGTGGGTCAGAAGGAGAGGAGAAGTGGTGATGAGAGGGATACGTCTTCCTCAGAGAAGGCGGGTGGCCGGAGGTCAAGCTCTGCCACCGACGATAGCCAGGATGGTGGTAGTGGTTTGGTTCAGGGGGGTGAGAGAGTGAGGGTTAGACAGTATGGGAAGTCTTGTAAGGAGGTTACAGGGCTTTATAAGAGCCAGAAGATTCAGGCTCATGTTGGATCCATTTGGAGCATTAAGTTTAGTTTGGATGGGAAGTACCTTGCTAGTGCCGGTGAAGATTGTGTGATTCATGTTTGGCGGGTTCTGGAGTCTGAGAGGAAGGGCGAGTTACTCGTGGAGAAACCGGACGATGGGAATTTGAACATGTTGTTTGTTGTTAATGGGTCGCCGGAGCCTTCTTCTCCTGGCATGGAGAATAATTTGGAAAAGAAGAGAAGGGGGAGGTTGTCTGTCAGCAGAAAATCGTTGAGCGTGGACCAGTTAGTAGTGCCGGAAACTGTGTTTGCTCTCACTGATAAACCGGTTTGCACCTTTAAGGGTCATCTCCATGACGTGCTTGACCTTTCTTGGTCCAAGTCTCAGCACTTGCTCTCATCTTCAATGGACAAAACTGTGCGCCTGTGGCATTTGTCTAGCAAGTCTTGTCTGAAAGTTTTTGCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGCGGATGATAGATACTTCATTAGTGGATCTTTGGATGCCAAGGTTCGTATTTGGAGCATACCTGATAGACAAGTTGTTGATTGGACTGATCTACATGAGATGGTCACTGCTGCTTGCTATACGCCAGATGGTCAGGGTGCACTAGTGGGTACTTACAAGGGTAGCTGTCATTCATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATAAATTTGCAGAACAGGAGAAAGAGATCAAACCACAAGAAAATTACTGGCTTCCAGTTTCTGCCAGGAAGTTCATCAGAAGTCCTCATCACTTCTTCTGATTCCCGGATTCGACTTGTTGATGGCATTGATCTAGTTCACAAGTTTAAAGGATTTCGCAATGCAAATAGCCAAATTTCTGCCTTCCTCACAGCAAATGGTAAATATGTTGTCTCAGCAAGTGAGGATTCTCATGTATACATATGGAGAAACGAAGCTGATTGTAGACCTAGCAGGGGTAAATGTATTACCATGACAAGCACATATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCTTGGCCAGGTATGGATGATTCATGGGAGATGCATGATCCGTACTTTGGAGAAGAACCTGAGCTTGATGATAATAGGGATGAGGAGGTCTCATCAGCCAATCATCCTCCTACCCCTGTAGAGGAAACTTTTGGTTCTGAGGGTTCACAATTTGCTTCGGGTTGCAATAACAGTCCACTTCATGGAACCATTGCAAGTGCAACAGATAGTTATTTTATTGATAGAATTTCTGCAACGTTGCCTGAGGAAAAACTTTTGACTACAAGGGATCCAAGCGCTCAGGCAAGTGCGGATTTATCTTATGGAGTAAATCATAATATGTCAGCATGGGGTATGGTGATTGTAACTGCTGGCCTTCAGGGGGAAATTAAAATTTTCCAAAATTTTGGATTGCCTCTTGGTATATAA | 2535 | 0.4769 | MTPAVEEDHHDPSLFHDSNDRLLSSCSCSTSASDDDAPTPQNDTKPIKNDTHALPQFPFPTMCKYDAWISEPSSLSERRSRLLRQFGLPTPPSPAATIPRSSSSHQCTDTSTAAATIPRSKSDNTADRGTKHCKSSVVPIRDNDNGFLVNNNININSSISGSHSVNNRICVSVSEEGGNGEGNVVDEVEQACTIRDLDNGKEFVVKRDGVWNEVKEVGTGRRLTVEEFEMTVGHSPIVQELMRRQSAEEGRDGDGVDGEGDCGNAGGVDDEGDGGKVRRKGGWFKFMSLKSVVVGQKERRSGDERDTSSSEKAGGRRSSSATDDSQDGGSGLVQGGERVRVRQYGKSCKEVTGLYKSQKIQAHVGSIWSIKFSLDGKYLASAGEDCVIHVWRVLESERKGELLVEKPDDGNLNMLFVVNGSPEPSSPGMENNLEKKRRGRLSVSRKSLSVDQLVVPETVFALTDKPVCTFKGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFAHSDYVTCIQFNPADDRYFISGSLDAKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGTYKGSCHSYNTSENKLQQKSQINLQNRRKRSNHKKITGFQFLPGSSSEVLITSSDSRIRLVDGIDLVHKFKGFRNANSQISAFLTANGKYVVSASEDSHVYIWRNEADCRPSRGKCITMTSTYEHFHCKDVSVAIPWPGMDDSWEMHDPYFGEEPELDDNRDEEVSSANHPPTPVEETFGSEGSQFASGCNNSPLHGTIASATDSYFIDRISATLPEEKLLTTRDPSAQASADLSYGVNHNMSAWGMVIVTAGLQGEIKIFQNFGLPLGI | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 745 | 761 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 722 | 761 | - | - | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 510 | 544 | - | - | |
Vian5g00367 | 844 | SUPERFAMILY | WD40 repeat-like | 354 | 681 | IPR036322 | GO:0005515 | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 237 | 276 | - | - | |
Vian5g00367 | 844 | SMART | WD40_4 | 546 | 584 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | SMART | WD40_4 | 637 | 678 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | SMART | WD40_4 | 353 | 392 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | SMART | WD40_4 | 463 | 501 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | SMART | WD40_4 | 504 | 543 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | SMART | WD40_4 | 597 | 636 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 360 | 401 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 295 | 336 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 97 | 123 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 26 | 55 | - | - | |
Vian5g00367 | 844 | PRINTS | G protein beta WD-40 repeat signature | 488 | 502 | IPR020472 | - | |
Vian5g00367 | 844 | PRINTS | G protein beta WD-40 repeat signature | 530 | 544 | IPR020472 | - | |
Vian5g00367 | 844 | PRINTS | G protein beta WD-40 repeat signature | 379 | 393 | IPR020472 | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 360 | 393 | - | - | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 510 | 544 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | FunFam | WD repeat-containing protein 44 | 451 | 717 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 86 | 132 | - | - | |
Vian5g00367 | 844 | PANTHER | WD REPEAT DOMAIN 44 | 8 | 841 | IPR040324 | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 296 | 312 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Vian5g00367 | 844 | Pfam | WD domain, G-beta repeat | 465 | 500 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | Pfam | WD domain, G-beta repeat | 359 | 391 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | Pfam | WD domain, G-beta repeat | 641 | 677 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | Pfam | WD domain, G-beta repeat | 506 | 543 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 470 | 510 | IPR001680 | GO:0005515 | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 244 | 258 | - | - | |
Vian5g00367 | 844 | MobiDBLite | consensus disorder prediction | 313 | 329 | - | - | |
Vian5g00367 | 844 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 470 | 504 | - | - | |
Vian5g00367 | 844 | Gene3D | - | 346 | 701 | IPR015943 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian5g00367 | Vian-Chr5 | 8657421 | 8676913 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian5g00367 | 457 | 675 | U-box Gene Family | AT1G04510 | 28.395 | 9.24e-06 | 47.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian5g00367 | K20241 | - | gmx:100806518 | 1356.27 |