Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00362 ATGGCTGACATAGCGGGTCTGGTTGAGGCTGCAGGGGCAAGATTTGGTTCATTGGAGCTTATTGGGCAAGGGTCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTAAACAAGGAAGTTGCTATCAAAATGATTGATTTGGAAGAATCTTATGGTGGTGTCATGGCGGAAATCGAGGGCAAAGTTATACCTTGCCGCCACATGGCAATAGAGGATGAAATAGAAGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTGCGTACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACCAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTGCAATCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGTGATTTACTTCATGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGAATTTGATGTCAATTTTGCAGCTGCAAACATTTTATTAACTGAGAATGGTGATGTAAAGGTTGCCGATTTTGGTGTTTCTGCACAGTTAACAAGAACCATATCAAGGAGAAAGAGACCTAGTGCTAAAGAGCTTCTCAGACATCGTTTCATTCGGAATGCCAGGAAGAGTCCTAAGCTATTGGAGAGAATAAGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATGAGGCACCACCTAGAAATGCCCCAAGGGGGATGGGGGAGGCATATGATACTGTTAAGGCTGCAAAAGATTTAAGGGGTGATGAGACTAATCAGCCTAGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTGTCCCGACCACCTCAATTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCAAAACAAAAGTCCAGAGAGTGGCTATCAGGTGGGATCTGGCAATAAAAATGAGTTGCTAGAGGCTTCTTTTGGAAAAGATTCAGGAATTCCCTACCATGATGAACATCTGGATGATCATCTTGAAGATGTAATTGACTCTCACTATGTTGGTCTTCCCTTTTCAAATAAAATGAAATATCTACACACAAGGAATGATGAGTTGTTTGGGAATGGATTGGGAACTGTTGTTGTTCGGTCTCCAAAAGCACCACAGTCATCACTGTTTCGTGACCAAAATTCCCGTTCTAGCAGCAGCTATGCTTCTTTTGAAGACGTTTCTACTAGCGGAACTGTGGTTTTGCGTAATCAGCACGATGATTCTGATTCTCCACAGACACCAAGGTCCCGATTGGGACTTAATAACAGAAATTCTAATGCCTCATTTGAAGATAGTGCTACAAATCTGGCTGAGGCAAAGGCTGCTATCCAAGGTGGATTGAGGAAAATGAATGTCCGAGATAGATTTGCACTGGGGAAACTCAACAATGATGTACAAGAAAGCAGGAGAGATCAAATGTCAACCAGCTCTGATTCTTCCAGACCATCTCGTGAATACATTGATGCACAAAAGGGGATTTCAAGATCACAGTATGATATTGATGATGAAGAAAGTGCGAAAATAATCTCATCCTCTGCGCCGTTATCTGTTTTGCTTATTCCTTCATTGAAAGAGGCCATTGCTGAGGATCCAGAAGGGCCAATTGCGCAAATTGTTATCAATGCTCTTTTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGCTCTTGTCAAAAACTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGCCGATTACTTAGTACGACTAACTCAGCTGAAGAAGCCCGAAATGCAGAGACAGATCTCAAGAAGAAACAAAACAGGGAAATTCATTCAAATAGCAATTTAAGTCCCCTCGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAGCCTCACGGGATCTAAATGCATCTTGA 1944 0.4192 MADIAGLVEAAGARFGSLELIGQGSFGDVYKGFDKELNKEVAIKMIDLEESYGGVMAEIEGKVIPCRHMAIEDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKEFDVNFAAANILLTENGDVKVADFGVSAQLTRTISRRKRPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDEAPPRNAPRGMGEAYDTVKAAKDLRGDETNQPSISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTQNKSPESGYQVGSGNKNELLEASFGKDSGIPYHDEHLDDHLEDVIDSHYVGLPFSNKMKYLHTRNDELFGNGLGTVVVRSPKAPQSSLFRDQNSRSSSSYASFEDVSTSGTVVLRNQHDDSDSPQTPRSRLGLNNRNSNASFEDSATNLAEAKAAIQGGLRKMNVRDRFALGKLNNDVQESRRDQMSTSSDSSRPSREYIDAQKGISRSQYDIDDEESAKIISSSAPLSVLLIPSLKEAIAEDPEGPIAQIVINALLNMERTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRLLSTTNSAEEARNAETDLKKKQNREIHSNSNLSPLARFLLSRWQGQASRDLNAS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00362 647 MobiDBLite consensus disorder prediction 381 401 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 295 312 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 257 312 - -
Vian5g00362 647 ProSiteProfiles Protein kinase domain profile. 15 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00362 647 Gene3D Transferase(Phosphotransferase) domain 1 115 196 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 261 280 - -
Vian5g00362 647 Pfam Protein kinase domain 18 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00362 647 Gene3D Phosphorylase Kinase; domain 1 6 112 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 599 620 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 413 442 - -
Vian5g00362 647 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 195 591 - -
Vian5g00362 647 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Vian5g00362 647 SUPERFAMILY Protein kinase-like (PK-like) 14 225 IPR011009 -
Vian5g00362 647 MobiDBLite consensus disorder prediction 474 503 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 479 494 - -
Vian5g00362 647 MobiDBLite consensus disorder prediction 605 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00362 Vian-Chr5 8451700 8482414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00362 196 644 MAP Kinase Kinase Kinase Kinase AT3G15220 44.563 1.93e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Vian5g00362 Pkinase 3.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00362 K08838 - gmx:100786501 645.966