Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00306 ATGGCAACACACCAATCTCTGTTAGACAACCCTAGAAAATTCGTTTCCAAAACTATATGCTTAATCTTCTCTGTAGCTGTTGTGCTAACTTCATCAGCTCTTATTGCTTCCTATCTCTCAAAACCCTCTCCCTTATTCAACCGCGACATTTCTCACCGTGTTTGTGATCATGCAATTGATCCTTCAGCCTGCTTGGCACATGTCTTGGAAGTGGAACAAGATCCGATGTTCGGTGCCACACAAAACCACAGATTCGGATTGCTCCAATCCTTTTTAATGAAATCCACCTCACACATTGAGAGAGTGATAGAGGCATCCAACGCTATGAGGGTGAGGATGAACAATCCAGGAGAAGAAGCCGCCTTGCGGGATTGCGTGGAGCTGATGGAGTTGTCCGTGGACAGACGTGCTCACCAATCATGTAACTTGCTTGGAGGGACTGAAGGGGCGAGCTCGAAGGGTGATGGAGGCAGAGGTTCAGGACTTGATCTCGAGAGCAAGAAGCTCTTTAGCCATGTTCGTTGCTGTTTTGCCTCCAAATCCGGAGGTTGA 552 0.4746 MATHQSLLDNPRKFVSKTICLIFSVAVVLTSSALIASYLSKPSPLFNRDISHRVCDHAIDPSACLAHVLEVEQDPMFGATQNHRFGLLQSFLMKSTSHIERVIEASNAMRVRMNNPGEEAALRDCVELMELSVDRRAHQSCNLLGGTEGASSKGDGGRGSGLDLESKKLFSHVRCCFASKSGG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00306 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 155 IPR035513 -
Vian5g00306 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 139 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00306 Vian-Chr5 6699920 6700544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00306 3 146 Carbohydrate Esterase AT1G11580 27.891 4.64e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00306 K01051 - gmx:100815836 160.999