Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00268 ATGCGGTGGAGGCGTCGAGGTTGGAGCCTGAAGTGGAGAAGGGAGATGGGTACTGGTTTTGAAGGAAGAGTACAAGGGGGCATCGGCCCTCAAGAAAAGTTGAAGCTTGAGAGAGATCCCATGAAGATGTTCATGGAAGGTGGGATTGAGGATCTAGCTAAGATGTCCCTTGAGGAAATTGAGAGCTCCAAGCACATTAAGGATGATATTGATGTTAGACTCAAGTGGCTTGGCCTTTTTCGTAGGAGAAAGCATCACTGTAAGTTTGACCTTGTTAATCTTGAAGAACTTGAAGCTGACCTCCTTGAGATTAATGCAAATAATGAGAAGTTGAAACACACCTACAATGAGCTATCAGAGTATAAGCTTGTTCAAGAGAAGACATTTTTTACATTGGAAATGGAAGTTGATGCAGCAATGATGTCTGTTGGATTTCTGGTTGCATTTGTTATCATATTCTTAACAAAAGCACTGAGTTGGGTGTGGTTGGAACCGAAAAGGGCAGAGAGATTCCTCAGAAGACAAGGCATAAAGGGAAACTCATACAAGCTTTTATTTGGAGACACAAAAGAATTAACCATGATGTTTCATCAAGCACATTCTAAACCCATACACATCGATGATGATGTTGCAACTCGCCTAGTCCCATTTCAAGATCAATTGGTTAAAGTTTCTGGTAGGAATTCGTTTTTCTGGTATGGTCCTAAGATTACAGTGAATATTATGGATCCTGAAGCAATAAAAGAGGTTCTGAACATGATAAATGACTTTCCAAAGCCAAACCTTAATCCACTTGGCAAGTACCTGATAACAGGACTTGTAGATCTTGAGGGAGAGAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTCAAGCTCAAGCTTGTGTTGCCTGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTTAGTGTGCGAAACAGGATCATGTGTGGTAGATGTCTGGCCATTCTTAAACAACTTGACAGCTGATGTCATTTCTCGTACAGCTTTCGGAAGTAACTATGAGGAAGGAAAAATAGTATTTCAACTCCTAAAAGAACAAGCTCAACTTACATCTAAGGTCTTTCGATCTATTTACATTCCAGGGTGGAGGTTTCTACCAACTACATTAAAGAAGAGGATGAAGAAGATTGACTACGAAATTGGAAATGTACTTCGTGGAATTATCCAAAAGCAAGAGGATATTATGAAAACATGTGAAGCTTCCAATGATAACCTATTAGGGTTACTATTGGAATCCAATCAAAAAGAGATTGAAGATCAAGGACTTAAGAAAGATTTTGGAATGAACACCAACGATGTAATTAACGAATGTAAGTTGTTTTACTTTGCTGGACAAGAAACAACATCGGTGCTACTAAATTGGACAATGGTGTTATTGAGTAGATTTCCCAAATGGCAAACACTGGCAAGAGAAGAAGTCATTGAAATATTTGGCACAAAAGAACCAGACTATGATGGATTAAATCGTCTTAAAGTTGTCACAATGATTTTGTATGAGGTTTTAAGATTATATCCACCAGTTACTGCTATTACAAGAATCCTAAGGAAGAAAGCTAAAGTTGGAAACATGACTTTACCAGCAGGAGCACTAGCTACTATTCCAGTTGTGTTGGTACATCGTGATTTTGAATTATGGGGAAGTGATGCAAAAGAGTTCAAACCAGAAAGATTTTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTTTCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCGTTGTCTCTCATTCTGCAAAACTTCAAGTTTGAGCTATCTTCCTCCTATGTTCATGCTCCAATTACAGTAATAACTGCTCAACCTCAATTCGGCACACACCTTATATTACAAAAATTATAG 1953 0.3871 MRWRRRGWSLKWRREMGTGFEGRVQGGIGPQEKLKLERDPMKMFMEGGIEDLAKMSLEEIESSKHIKDDIDVRLKWLGLFRRRKHHCKFDLVNLEELEADLLEINANNEKLKHTYNELSEYKLVQEKTFFTLEMEVDAAMMSVGFLVAFVIIFLTKALSWVWLEPKRAERFLRRQGIKGNSYKLLFGDTKELTMMFHQAHSKPIHIDDDVATRLVPFQDQLVKVSGRNSFFWYGPKITVNIMDPEAIKEVLNMINDFPKPNLNPLGKYLITGLVDLEGEKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMLVCETGSCVVDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAQLTSKVFRSIYIPGWRFLPTTLKKRMKKIDYEIGNVLRGIIQKQEDIMKTCEASNDNLLGLLLESNQKEIEDQGLKKDFGMNTNDVINECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRILRKKAKVGNMTLPAGALATIPVVLVHRDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPITVITAQPQFGTHLILQKL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00268 650 Gene3D Cytochrome P450 161 649 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS P450 superfamily signature 512 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS P450 superfamily signature 460 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS P450 superfamily signature 589 598 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS P450 superfamily signature 598 609 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 CDD CYP72 215 646 - -
Vian5g00268 650 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS E-class P450 group I signature 598 621 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS E-class P450 group I signature 449 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS E-class P450 group I signature 469 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 PRINTS E-class P450 group I signature 588 598 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 591 600 IPR017972 GO:0005506|GO:0016705
Vian5g00268 650 Coils Coil 94 114 - -
Vian5g00268 650 FunFam Cytochrome P450 734A1 162 650 - -
Vian5g00268 650 Pfam Cytochrome P450 230 624 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00268 650 Gene3D - 16 128 - -
Vian5g00268 650 PANTHER CYTOCHROME P450 FAMILY MEMBER 154 642 - -
Vian5g00268 650 SUPERFAMILY Cytochrome P450 213 648 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00268 Vian-Chr5 5738820 5745049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00268 133 650 Cytochrome P450 AT3G14690 54.335 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00268 - - gmx:100780475 855.899