Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00220 ATGAGTTTGAGTATGAGTTTGTGTGGTAGTTATAGTCTTCAGTTTCCATGTCGCAGAATTGCAAGCTGCAATCTTCACAACGATGGCAGCCATGTTGTCCCCATCAATACGCACCGAAAGCCTTCGGAGCCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGGATTGGAGTCATGACAGCAGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTGGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCAAACGAAGCTGTTCAGGGCCAACTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCGCTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAGAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGACAAGGATTGCCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGGCTGAATCTTCTCGAGGTAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCTGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACCCTTCTGGGCTATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGCAGCTTGCTTTTGACATACACAACTGGTTATGTTTCTCCCTTACTATTGGCTGCGTCTTTTGCTGGAGCATTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1035 0.4589 MSLSMSLCGSYSLQFPCRRIASCNLHNDGSHVVPINTHRKPSEPKNCLQPKWKINGNNLTTWIGVMTAAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEVIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00220 344 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 118 343 - -
Vian5g00220 344 Pfam Cytochrome C biogenesis protein transmembrane region 128 334 IPR003834 GO:0016020|GO:0017004
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00220 21 344 Chloroplast and Mitochondria Gene Families AT5G54290 70.710 1.29e-142 406
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00220 - - pvu:PHAVU_011G155100g 635.565