Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00192 ATGAGGACTCTCGACTCAGTAATTCACAGAGATCTCAATGCTAGCAATGTTCTATTAGACCCTGAGATGAATCCCAAAATATCAGATTTTGGATTCGCTAGGACCTTTGAAATAGGACAGAACCAAACAAAGACAAAACGAGTTGTGGACACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTATGTGAAATCGTATGTTTTCAGCTTTGGAGTTATTGTCCTAGAAATCATTTGTGGAAGAAAGAATAGTGGATTCCATCTATCAGAACATGGTCAAAGTCTTCTTTTATGTGAGTTTTCTCTCCTATTGTTCAAGGAGTCTTTGAACCATAGAGTTCAACAACATTCACAAATTACATGCAGGCGTGGAGCATATGGTGTGCAAGAAAATGGTTGGAATTGA 417 0.3789 MRTLDSVIHRDLNASNVLLDPEMNPKISDFGFARTFEIGQNQTKTKRVVDTYGYMAPEYAMEGLFYVKSYVFSFGVIVLEIICGRKNSGFHLSEHGQSLLLCEFSLLLFKESLNHRVQQHSQITCRRGAYGVQENGWN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00192 138 SUPERFAMILY Protein kinase-like (PK-like) 7 87 IPR011009 -
Vian5g00192 138 Pfam Protein tyrosine and serine/threonine kinase 6 85 IPR001245 GO:0004672|GO:0006468
Vian5g00192 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00192 138 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 101 - -
Vian5g00192 138 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00192 Vian-Chr5 3873240 3873760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00192 6 100 Receptor kinase-like Gene Family AT4G23150 61.053 1.75e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian5g00192 PK_Tyr_Ser-Thr 6.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00192 - - vun:114170456 168.703