Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00183 ATGGCCACCGAAAAGCTTGGAGGTTGTGCCAAGTTCTTTGCAAGCTCAAAACCCTACTTGGCTATGATCTCTTTGCAGTTTGGGTATGCTGGCATGAACATTATCACAAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGTCACGCTTTCGCAACTGCCGTTATAGCTCCTTTTGCATTTATCTTTGAAAGGAAAGGTCAACCGAAGATAACATTCTCAATTTTCATGCAACTTTTTATCCTAGGTCTTCTTGGGCCAGTGATTGATCAAAATTTCTACTATGCCGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCTGTGTTTTGCAGAATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTTGCAGGAGCTATGCTAATGACCTTATACAGAGGTCCTATAGTGGAGATGTGGGCCAAACATCCCCACAATAAAACCAATGGAACAACAAGCACAGGATCATTGGACAAAGATTGGTTCTTAGGATGCATCTTTCTTATCATTGCCACCCTTGCATGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACCTACAAGAATCATCAACTCAGCCTGACTTCACTTGTGTGCTTTATTGGCACTGTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAACCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTGATTAAGATGAAAGGACCTGTCTTTGCAACTGCTTTTAGCCCTTTGATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAAGAAATTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAGTGGAGAGTAAAGTGGCAGATGAAATTCCATTGGCTGTAAAAGATGGTCAAAGTTCTGTAATTTCAGGGTTAAATATGATTGATGTAAAAAATGATTTTACTGAAGAAGATTCCAAGAATAAGAAGCCCTCCTCAGTTGTAATAAACATGACTGTTGCAGAGTCTCCAAGCAAAGATAACCAAGAGGGAAAGGCTTAA 1212 0.4068 MATEKLGGCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFSIFMQLFILGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINMKQVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMWAKHPHNKTNGTTSTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTVQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKMKGPVFATAFSPLMMIIVAIMGSFILAEEIYLGGVIGAILIVIGLYSVLWGKHKEQVESKVADEIPLAVKDGQSSVISGLNMIDVKNDFTEEDSKNKKPSSVVINMTVAESPSKDNQEGKA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00183 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Vian5g00183 403 MobiDBLite consensus disorder prediction 373 403 - -
Vian5g00183 403 PANTHER WAT1-RELATED PROTEIN 17 342 IPR030184 GO:0016020|GO:0022857
Vian5g00183 403 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Vian5g00183 403 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Vian5g00183 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 336 - -
Vian5g00183 403 MobiDBLite consensus disorder prediction 381 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00183 Vian-Chr5 3685436 3687867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00183 1 400 Nodulin-like Gene Family AT5G07050 66.830 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00183 - - gmx:100804390 696.427