Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00154 ATGGGAGGGGTGGGTAAGACCACTCTTGCCCAACATGTATTCAATGATCCAAGGGTGGATGAGGCTAAATTTGATGTCAGAGCCTGGGTTTGTGTTTCAGTTGAATCTGATGTTTTCAAAGTATCAAGAAAAATTCTTGAGGATGTTACTAGATCACCTGATCATAGTTCAGATACAGATATGGTTCACAGAAGATTGAAAGAAAAATTGACGGGCAAAAAATTTCTTGTTGTTTTGGATGATGTTTGGAACGAAACCCTATCTAATTGGAAAGAGGTGCGAAAACCCCTTCTTCTCGGAGCCCAAGGAAGTAGAATTGTTGTGACTACCCGTAGTAAGGAAGTTGCTTCTACCATGTTTTCAGAAGAACGCTTTCTAAAGCAATTGCAGGAAGATGATAGCTGGGAGTTGTTTGCTAAACATGCATTTCGTGATGATACTCAACCAAATCCAGAATGCAGAGAGATTGGCAAGAAGATTGTTAAAAAATGTAAAGGACTACCTCTTGCCTTGAAAGCAATAGGAAGTCTATTATACAACAAATCATCTGTTTCAGAATGGGACACTGTGTTCCAAAACGAGATATGGGAAATTCCAAAAGATCGTTGTGATATTGTTCCCGCTTTAGCATTGAGCTATGTCCACCTGCCTTCCCATTTGAAGACCTGCTTTGCTTATTGTGCCTTGTTCCGCAAGGATTATGAGTTTAAGAAGGAAGAGTTGACTCAGTTGTGGATGACTGAAAACTTTCAACAGCATAGTAAGACTCCGGATGAAACTTGCCAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACCCTCAGGTAATGGGAAAGAACTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAGATACATCGCCGGAGACATATTTTTCAGGTGCAAAGATAGTCAAACAAATAATATACAAAAAGTAACTCGGCATTTTTTATTTGAACTTCCTAACTTTGGACGCTTTCATGAATTTGGAACTTTATGCAAAACGGAAAGCTTGCGTACATTTCTACCAACACCAGATAGGAAACTGGATTACTTTCATTGGTTTTGCAGTATGTCGATACATGAATTGTTCTCCGAGTTCATGTTCTTGCGTATTTTATCGCTCTCTCATTGTTCTAACCTTTTAGAGTTACCTGATTCTGTCGGCAATCTTAAACTTCTTCGTTCCTTAGACCTCTCTCATACTGCAATAAGAAAACTACCTGAAAAAATATGTTCACTATCCCACTTGCAAATACTGGAGTTGAACTATTGTACATATTTGGAAGAGTTGCCCATAAATTTGCATTTACTTACTAATTTGTGTAGCCTTGAATTTAGGTTCACTAAAGTGAGAAAAGTGCCACCAGGTTTGGAAAAATTAAAGAATCTTGTAGTAATGATGAATGTCTTTTATGTTGACCATAGCATGGAGTCGGGTATTCAACGGCTAGGAAAGCTTAATAACCTTTCTGAACACCTAGAAATTTGGGGACTGCAGTGCATTAAGAATCCTGAGGATGCATTAGAAGTCGATTTGAAGAATAAAACACACCTTGTGAGGCTGACATTGGCATTGGAGAGGACTGGGAACTCTATTGATTCAAAAAAAGAAGAAGACGTAATTGAGAATCTGCAACCTTCCAAAAACTTAAAGGAGTTGTCAATCTTAAACTATGGTGGGAGTAAATTTCCAAACTGGTTACTAGAAGATTCGTTACCAAACCTGGTGTCCTTAGTGTTGCTCAATTGTAAATCTTGCCAACATTTACCTCCGCTTGGTCTTTTGCCATTTCTGAAGAGCCTGTATATTTCAGGGTTTGATGAGACCGTGAGCATTGATGCTTATTTTCATGGAAACAACTCTTCTTCATTTCAATCCCTTAAAAAGTTGGAGTTCTCCGATATGAAGCAATGGGAAAAATGGGAATGCCAAGCTGTGACAGGTGCTTTTCCAAATCTTCAAATTCTTTCTCTGAAGAAATGTCCGAAACTGAAAGGACAGCTGCCAGAGCTACTTGTTCCTTTGAAAACACTAAAAATTACACGTTGCCAACAACTTGAAGCTTTCCCTCCCAGGACTCTAGAATTAGACCTACGTCACTGTGGAAAGTTGCAATTGGATTGGGCTCCAATGGAATGGCCTAGAATGGACGGGCACCACATGACAGCATTTTTCTCTGAAAGTGATGGGTCCCACACTCTTGATGATTTGGAAATTGTAGAGGTAATCAGTGATGGCTCTATCCCTCTAACGACCTTTCCACTAGACTCCTTCCCAACAGTCAAGAGACTTGTTCTCTCTTGGTTACGTAATCTAGAGATGATTTCACAAGATCAAGCTCATCATGATCATCTACTGGATCTGACAATCACAAGATGTCCTAAATTTGAATCGTTGTCTGGAAACATGCGTGTGTTGTCTCTTACATCGCTATGGATAGAAGACTGTCCAAGATTTAAGTCGATCCCTTACGGAGGTTTGCCATCAAATTTGGAGAATCTGACAATCAAAGGGTGCCCTAAGTTTGAATCATTACCCGACTCTGTTGGCAATCTCAAGCTTCTTCGTTCCTTAGACCTCTCTGATACTGCAATAAGAAAACTACCTGAAAATATATGTTCACTATCCCACTTGCAAATACTGGAGTTGAACTATTGTACATATTTGGAGGAGTTGCCCATAAATTTGCATTTACTCACTAATTTGTGTCGCCTTGAATTTAGGTTCACTAAAGTGAGAAAAGTGCCACCAGGTTTGGAAAAGCTAAAAAATCTTAAAGTAATAATGAGTAACTTTAATGTTGACCTTATCATGGAGTCGGGTATTCAACGGCTAGGAAAGCTCAACAACCTTTACGAAGACTTATCAATTGGGGAACTGCATGACATTGAGAATCCTCAGGATGCATTCGAAGCTGATTTGAAGAATAAAACACACATTGAGAGTCTGACATTGGGATGGGAGAGGACTGGGAACTCTATTGATTCAAAAAAAGCAGAGGACGTACTTGAGAATCTGCAACCTTCCAAAACCTTAAAGGAGTTGTCAATCTTTAACCATGGTGAGAATAAATTTCCAAACTGGTTGCAACAAACTTCAATTTGGAATATGGTGTCGTTAGAGTTGAACAAATGTAAATCTTGCCAAAGTTTACCTCCGCTTGGTCTTTTGCCATTCCTCAAGAAGCTGGTGATTTCAGGGTTTGATCAGATAGTGAATATTGATGCTGATTTTCATGGGAAGAACTCTTCTTCGTTTAAATCTCTTGAAACATTGTATTTCTCCGATATGAGACAATGGGAAAAAAGGGAATGTAAAGTTGTGACAGGTGCTTATCCATGTCTACAACATCTTTCTATAAGCTTTTGTCCCAAACTAAAAGGACAATTGCCAGAGCAACTTGTTCCTTTGGAAACACTACACATTACAAACTGCGAACAACTTGAGGCTTTCGCTCCAAGGGCTCTAGATTTAGAACTACGTCACTGTGGAAAGCTACAATTGGATTCGGCCATGAAAAGGCTCGTAATGGGTGGGCACAACACGGAAGCATCCTTGCTGGAAATGGTTGGATCTAACACTCTTGAGCACTTGGACATTTCTTCATCCCTGGAGTCCATGAGTGATGACTGTGTCTTTGTAAGGACCTTTTCACTAGATTTCTTTCCAATACTCAGGACCCTTAATCTTAGAGGGTTTGGTAATCTACAGAAGGTTTTACAGGATCACGCTCATTATCATCTCCAGGATCTGACAATCAAAAAATGTCCTAAATTTGAATCATTATCTGGAATCATGCATATGTTGTCTCTCAAATCACTATGGATAGAAGATTGTCCGAGACTTGTGTCGTTTCCTGATGGAGGTTTGCCATCAAATCTAAATGACATGAGACTGAGTAATTGTTCTAGACTTGTTTTCTCACTGAAAGGAGCTTTCGGAGACCGTTCTTCTTTGGAAAGCTTGTGGATTGAAGGAATGGATGCAGAATGTTTTCCTGGTGAAGGCTTGCTTCCACTCTCTCTTACTTCTTTAACAATATGTGATTGTCCAAATCTAGAAAAGTTAGATTATAAAGGTCTTTATCAACTCTCATCTCTCAGAAGACTGACTCTTGTTAGCTGCCCTAACCTCCAATGCTTACCAGAGGAAGGTCTTCCAAGATCAATTTCATATCTTTGTATAGGCGATTGTCCTTTGCTCGAACAGCGTTGCCAGACAGAAGGAGGGGAAGATTGGGAAAAGATTGCTCACATTCAAAATCTGAATATATTGTAA 4293 0.3934 MGGVGKTTLAQHVFNDPRVDEAKFDVRAWVCVSVESDVFKVSRKILEDVTRSPDHSSDTDMVHRRLKEKLTGKKFLVVLDDVWNETLSNWKEVRKPLLLGAQGSRIVVTTRSKEVASTMFSEERFLKQLQEDDSWELFAKHAFRDDTQPNPECREIGKKIVKKCKGLPLALKAIGSLLYNKSSVSEWDTVFQNEIWEIPKDRCDIVPALALSYVHLPSHLKTCFAYCALFRKDYEFKKEELTQLWMTENFQQHSKTPDETCQQYFNDLLSRSFFQPSGNGKELFVMHDLLNDLARYIAGDIFFRCKDSQTNNIQKVTRHFLFELPNFGRFHEFGTLCKTESLRTFLPTPDRKLDYFHWFCSMSIHELFSEFMFLRILSLSHCSNLLELPDSVGNLKLLRSLDLSHTAIRKLPEKICSLSHLQILELNYCTYLEELPINLHLLTNLCSLEFRFTKVRKVPPGLEKLKNLVVMMNVFYVDHSMESGIQRLGKLNNLSEHLEIWGLQCIKNPEDALEVDLKNKTHLVRLTLALERTGNSIDSKKEEDVIENLQPSKNLKELSILNYGGSKFPNWLLEDSLPNLVSLVLLNCKSCQHLPPLGLLPFLKSLYISGFDETVSIDAYFHGNNSSSFQSLKKLEFSDMKQWEKWECQAVTGAFPNLQILSLKKCPKLKGQLPELLVPLKTLKITRCQQLEAFPPRTLELDLRHCGKLQLDWAPMEWPRMDGHHMTAFFSESDGSHTLDDLEIVEVISDGSIPLTTFPLDSFPTVKRLVLSWLRNLEMISQDQAHHDHLLDLTITRCPKFESLSGNMRVLSLTSLWIEDCPRFKSIPYGGLPSNLENLTIKGCPKFESLPDSVGNLKLLRSLDLSDTAIRKLPENICSLSHLQILELNYCTYLEELPINLHLLTNLCRLEFRFTKVRKVPPGLEKLKNLKVIMSNFNVDLIMESGIQRLGKLNNLYEDLSIGELHDIENPQDAFEADLKNKTHIESLTLGWERTGNSIDSKKAEDVLENLQPSKTLKELSIFNHGENKFPNWLQQTSIWNMVSLELNKCKSCQSLPPLGLLPFLKKLVISGFDQIVNIDADFHGKNSSSFKSLETLYFSDMRQWEKRECKVVTGAYPCLQHLSISFCPKLKGQLPEQLVPLETLHITNCEQLEAFAPRALDLELRHCGKLQLDSAMKRLVMGGHNTEASLLEMVGSNTLEHLDISSSLESMSDDCVFVRTFSLDFFPILRTLNLRGFGNLQKVLQDHAHYHLQDLTIKKCPKFESLSGIMHMLSLKSLWIEDCPRLVSFPDGGLPSNLNDMRLSNCSRLVFSLKGAFGDRSSLESLWIEGMDAECFPGEGLLPLSLTSLTICDCPNLEKLDYKGLYQLSSLRRLTLVSCPNLQCLPEEGLPRSISYLCIGDCPLLEQRCQTEGGEDWEKIAHIQNLNIL 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00154 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 227 IPR027417 -
Vian5g00154 1430 SUPERFAMILY L domain-like 1199 1422 - -
Vian5g00154 1430 PANTHER DISEASE RESISTANCE PROTEIN RP 796 1151 IPR044974 GO:0006952
Vian5g00154 1430 SUPERFAMILY L domain-like 285 696 - -
Vian5g00154 1430 Gene3D Ribonuclease Inhibitor 754 1110 IPR032675 -
Vian5g00154 1430 Gene3D Ribonuclease Inhibitor 1295 1413 IPR032675 -
Vian5g00154 1430 Gene3D Ribonuclease Inhibitor 1134 1294 IPR032675 -
Vian5g00154 1430 PRINTS Disease resistance protein signature 69 83 - -
Vian5g00154 1430 PRINTS Disease resistance protein signature 416 432 - -
Vian5g00154 1430 PRINTS Disease resistance protein signature 164 178 - -
Vian5g00154 1430 Pfam NB-ARC domain 1 192 IPR002182 GO:0043531
Vian5g00154 1430 Gene3D Ribonuclease Inhibitor 351 717 IPR032675 -
Vian5g00154 1430 SMART LRR_typ_2 857 880 IPR003591 -
Vian5g00154 1430 SMART LRR_typ_2 442 465 IPR003591 -
Vian5g00154 1430 SMART LRR_typ_2 904 927 IPR003591 -
Vian5g00154 1430 SMART LRR_typ_2 395 418 IPR003591 -
Vian5g00154 1430 FunFam Probable disease resistance protein At5g66910 128 211 - -
Vian5g00154 1430 SUPERFAMILY L domain-like 786 1158 - -
Vian5g00154 1430 Gene3D - 128 211 IPR042197 -
Vian5g00154 1430 Gene3D - 1 127 IPR027417 -
Vian5g00154 1430 Gene3D - 212 296 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00154 Vian-Chr5 3076688 3080980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00154 790 930 WRKY Transcription Factor Family AT4G12020 28.169 2.27e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00154 - - vra:106752401 2628.2