Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00135 ATGATGGAGGAGGAGAAAGAAGAAACAACCAACCACAACCTGGAACAAAACAAAAACCAAAACCTTAACCTAGACCACAACAACCACCCTTCTAACACTCTCCCAATCAAGGAAGAGAGTGGTTTTAGATCAAAGGGTTTTGGAAGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTTGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCTCGACACGTGTCAGCACGTGCCAACTGCACCAAGTCACCCAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAGTCGGCAACTGCAGAACATCCCTCCTCCTGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGGCCCTCTCCTCTCCTCGCCACCACCCCCGCCGCTCGCGGTGCCACCCTCGTCGGCAGAACCGCCGCAACAGTCGCCGCCGTCAGAGCCACTTGCAGTTGTGCAGAACTCGAATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGTGTTAGGAGAAAAGTGTTGTGAAGAAGTATGTAGGAAGAATCCATTGGAGACAGATAGCAGCACTCCTGCAGTATACAGCAATAAGAAGGAAAAGAGGAAGAAGAAGGTGAATGATGAGAAGAGAAGAGGGAGAAGAAGGAAAGAGTATATGGAGATAGGAGAAAGCTTAAGATGGTTAGCAGAAGCTATGATAAGGTCAGAAGAAGGAAGAATGGAGACAATGAAGGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATAATTGCCAACACACAGTTAGAGATTGCTAGGATCTTTGCTACTGTCAACAACAAACCTCTTGATTCTTCTCTAAGAATTGGAAGGAATTAA 981 0.476 MMEEEKEETTNHNLEQNKNQNLNLDHNNHPSNTLPIKEESGFRSKGFGSGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLDLLLRGTGPLLSSPPPPPLAVPPSSAEPPQQSPPSEPLAVVQNSNGSNGVDDKLVKEDVLGEKCCEEVCRKNPLETDSSTPAVYSNKKEKRKKKVNDEKRRGRRRKEYMEIGESLRWLAEAMIRSEEGRMETMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFATVNNKPLDSSLRIGRN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00135 326 MobiDBLite consensus disorder prediction 150 175 - -
Vian5g00135 326 MobiDBLite consensus disorder prediction 176 190 - -
Vian5g00135 326 MobiDBLite consensus disorder prediction 14 38 - -
Vian5g00135 326 FunFam Trihelix transcription factor ASIL2 58 123 - -
Vian5g00135 326 MobiDBLite consensus disorder prediction 1 54 - -
Vian5g00135 326 MobiDBLite consensus disorder prediction 215 243 - -
Vian5g00135 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 312 IPR044823 -
Vian5g00135 326 Gene3D - 58 123 - -
Vian5g00135 326 Pfam Myb/SANT-like DNA-binding domain 55 142 IPR044822 -
Vian5g00135 326 MobiDBLite consensus disorder prediction 147 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00135 Vian-Chr5 2591839 2593554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00135 34 150 Trihelix Transcription Factor Family AT3G14180 34.711 6.04e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian5g00135 Myb_DNA-bind_4 3.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00135 - - gmx:100793978 385.571