Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00066 ATGAATGACGGTAGACAAATGGGGTTGCATTATGTAGACGCAGGTTTTCCTTATGCTGTGAATGAAAACTTTGTGGATTTCTTTCAAGGATTCTCTCATGTGCCCGTCAATTATGCCTTTGCTGGTTCAATGCCTGATCAGGAAAGTGTCTACTGGTCAATGAACATGAATCCCTATAAGTTTGGATTGTCTGGCCCTGGTAGTACATCTTACTATAGTTCTTATGAGGTAAATGGTCATTTGCCGAGAATGGAGATTGACAGGACTGAGTGGGAATACCCTTCGACAATTACTGCTGTGGAACAAGCTACAGCAGATTCTCCGCCTAGAAGAGATGGAGTCACTAGCATGCAGACCATCCCTGAAGAATGCAGTCCAAATCATCTTGAGTCCAATAGTAGTAGCCAGGTCATATGGCAAGACAACATTGATCCTGATAATATGACTTATGAGGAACTACTGGATTTGGGAGAGGCAGTTGGGACTCAGAGCCGTGGTCTTTCACAAGAACTTATTGATATGCTTCCAACCTCGAAGTACAAATTTGGTAGCTTATTCAAAAGAAAAAATTCTGGGAAAAGTCTCCAGCTTTATTTTCTACTTTCAGGATATACTGACAGTGAAATTGCTTTGAAAATAGTGAATGCATCACCAAGTGGCTTAGCATTAACAAGAAATGTCCTGTGTGCAACACTGAGGTTTTTGGCGAGGAATCAACGCATTAGCATCAAGATGGCAAAAGGGATCCTTTTTGTCCATTAA 762 0.4134 MNDGRQMGLHYVDAGFPYAVNENFVDFFQGFSHVPVNYAFAGSMPDQESVYWSMNMNPYKFGLSGPGSTSYYSSYEVNGHLPRMEIDRTEWEYPSTITAVEQATADSPPRRDGVTSMQTIPEECSPNHLESNSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLFKRKNSGKSLQLYFLLSGYTDSEIALKIVNASPSGLALTRNVLCATLRFLARNQRISIKMAKGILFVH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00066 253 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 192 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00066 Vian-Chr5 1102547 1108392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00066 10 193 C3H Transcription Factor Family AT3G63530 50.811 9.23e-61 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00066 K19045 - gmx:100792734 371.318