Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00065 ATGGTTGATCAGGTTCAGCATCCTAGAGTGATGGAGAAGGTTGCAAGTCAGCTACATCTTTTAACTGGCCTTCCACTGTACCACCAGAGGCGATCTTTCCAGAATTACTCCAATGCAGCATTTCAGTATCCAGTGATGCCAGCATGCAGAGGTGCAATTGATGTCTCTGCTGTTGCAGTCTCACCTCTGTTTGTCCCTTCTCCTGCTGAGAAGGGAAACTTCCTCATTGACTTTCTCATGGGTGGAGTTTCTGCTGCCGTCTCCAAAACTGCTGCTGCCCCCATCGAACGCGTCAAGCTCTTGATCCAGAACCAGGATGAGATGATCAAAGCCGGTAGACTCTCTGAGCCCTACAAAGGTATCGGTGACTGTTTTAAGAGGACAATGAACGAAGAGGGTTTTGGTTCCCTTTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCACTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCCTCAGGAGGTGCTGCCGGTGCCTCTTCCCTTTTCTTTGTCTACTCCCTTGACTACGCTCGTACCCGTCTGGCTAATGATTCCAAGGCTGCAAAGAAGGGTGGAGAAAGGCAATTCAATGGCCTTGTTGATGTCTACAGGAAGACATTAGCTTCTGATGGTGTTGCTGGTCTTTACCGTGGCTTCAACATTTCCTGTGTTGGAATCATCGTGTATCGTGGCCTCTACTTTGGAATGTATGATTCCCTCAAACCAGTTCTCTTAACCGGCTCTTTACAGGATAGCTTTTTCGCTAGCTTTGCTCTTGGATGGTTGATCACGAATGGTGCTGGTTTAGCTTCATACCCAATTGATACTGTGAGAAGAAGAATGATGATGACATCTGGTGAAGCTGTGAAGTACAAGAGCTCCATGCATGCGTTCACACAGATCCTTCAGAATGAGGGTGCAAAGTCATTGTTTAAGGGAGCTGGTGCCAACATTCTTCGTGCTGTTGCCGGTGCTGGTGTGCTGGCTGGTTATGACAAGTTGCAGGTCATAGTCTTTGGCAAGAAGTATGGCTCTGGTGGAGCTTAA 1125 0.4738 MVDQVQHPRVMEKVASQLHLLTGLPLYHQRRSFQNYSNAAFQYPVMPACRGAIDVSAVAVSPLFVPSPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMNEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYRKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMHAFTQILQNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00065 374 Pfam Mitochondrial carrier protein 73 169 IPR018108 -
Vian5g00065 374 Pfam Mitochondrial carrier protein 278 363 IPR018108 -
Vian5g00065 374 Pfam Mitochondrial carrier protein 176 272 IPR018108 -
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 90 104 IPR002067 GO:0055085
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 77 90 IPR002067 GO:0055085
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 140 160 IPR002067 GO:0055085
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 286 308 IPR002067 GO:0055085
Vian5g00065 374 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Vian5g00065 374 Gene3D Mitochondrial carrier domain 75 370 IPR023395 -
Vian5g00065 374 PRINTS Adenine nucleotide translocator signature 151 163 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 PRINTS Adenine nucleotide translocator signature 74 86 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 PRINTS Adenine nucleotide translocator signature 118 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 PRINTS Adenine nucleotide translocator signature 177 190 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 PRINTS Adenine nucleotide translocator signature 282 298 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 FunFam ADP,ATP carrier protein, mitochondrial 75 370 - -
Vian5g00065 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 165 IPR018108 -
Vian5g00065 374 SUPERFAMILY Mitochondrial carrier 72 359 IPR023395 -
Vian5g00065 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 269 IPR018108 -
Vian5g00065 374 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 69 373 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian5g00065 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 363 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00065 Vian-Chr5 1089238 1090587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00065 1 374 Antiporters AT5G13490 78.974 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00065 K05863 - gmx:100793257 654.825