Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00052 ATGGTGCAAAAGCCGAAGCAGTTGAGTTTCTGGGTGTATGGGAAGAAGGCATTGGATGTGAGCAAAAGGTACGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAACACAAAAGATCATCACGTCATGCAGAAAACGAAAGGGATTTGATGGACATTCTGCTTGATGTTCACCACGATCCTCATGCAGAGTTCAAGATCACAAGAACTCATATCAAAGCCTTCTTCTTGAAGGATCTCTTCATTGCAGGCACAAACACCTCAGCAGAAGGCACGCAATGGGCGATGGCTGAGCTGCTGAACAACCCTGAAGCCTTTGAAAAAGTGAGAAAGGAGATAGAGTTGGTGACCGAGAATGGAAGGCTAGTTGAGGAGTCAGATGTTGGAAAAATGCCATATTTGCGAGCAGTTGTGAAGGAAACACTGAGACTCCATCCACCAGCACCAGTGACGACAAGAGAGTGTCGGCAACAGTGCAAGATAAATGGGTTTGACGTGGCACCAAAGACAGCAGTGGCAATAAATTTGTATGCCATAATGAGGGACCCTGATTCCTGGGACAATCCGAATGAGTTTGTCCCTGAAAGGTTCTTCTTGCAAGAGGAGGATGAGAGAATGAAGTTGAATTTTGTTCCATTTGGAGGTGGAAGGAGAGGCTGTCCAGGAACAGAACTTGCTTTCATCTTCATACACACTGCAGTGGCTGCTATGGTGCAGTGCTTTGATTGGAAGATTGGTGAAGATGGAAAAGGAAAAAAGGTCAATATGCAATCTGGTTCATCTGGCTTGTCTTTGAGCATGGCTCAACCCCTTCTCTGTGTTCCAGTACTACATTTTAATCCATATGTATAA 852 0.4519 MVQKPKQLSFWVYGKKALDVSKRYDELLEKVLKEHEHKRSSRHAENERDLMDILLDVHHDPHAEFKITRTHIKAFFLKDLFIAGTNTSAEGTQWAMAELLNNPEAFEKVRKEIELVTENGRLVEESDVGKMPYLRAVVKETLRLHPPAPVTTRECRQQCKINGFDVAPKTAVAINLYAIMRDPDSWDNPNEFVPERFFLQEEDERMKLNFVPFGGGRRGCPGTELAFIFIHTAVAAMVQCFDWKIGEDGKGKKVNMQSGSSGLSLSMAQPLLCVPVLHFNPYV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00052 283 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 272 - -
Vian5g00052 283 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 213 222 IPR017972 GO:0005506|GO:0016705
Vian5g00052 283 Gene3D Cytochrome P450 4 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS P450 superfamily signature 211 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS P450 superfamily signature 83 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS P450 superfamily signature 220 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 Pfam Cytochrome P450 14 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 220 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 210 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 175 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 92 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 72 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g00052 283 SUPERFAMILY Cytochrome P450 11 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00052 Vian-Chr5 847022 847949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00052 6 283 Cytochrome P450 AT3G20960 49.823 6.09e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00052 K23814 - gmx:100790065 435.647